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7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
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. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
P | K | V | G | E | I | L | E | C | N | F | G | N | Y | P | V | S | Q | N | G | P | F | S | T | T | Y | Y | D | G | R | I | P | P | E | M | I | K | N | R | L | V | V | V | L | N | G | K | I | . |
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N | G | N | A | C | I | V | V | P | L | S | T | T | R | D | Q | D | K | L | K | R | G | M | H | V | E | I | A | S |
Query Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |
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Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
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|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
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|   |   |   |   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | K | R | G | D | V | Y | F | A | D | L | . |
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S | P | V | V | G | S | E | Q | G | G | V | R | P | V | L | V | I | Q | N | D | I | G | N | R | F | S | P | T | A | I | V | A | A | I | T | A | Q | I | Q | K | A | K | L | P | T | H | V | E | I | D | A | K | R |
Template Known Secondary structure |   |
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| T | T |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S |
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| T | T | S |
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| S |  |  |  |  |  |  |
| S |
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |  | S | S |
| S | S |
| S | S | T | T |  |  |  |  |
|  |  |  |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template SS confidence |   |
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  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | |
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. | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
N | V | I | N | D | L | Q | F | F | D | Q | Q | I | R | W | A | K | A | D | L | V | Q | Q | V | S | R | N | R | L | N | R | A | R | T | Y | R | G | Y | L | N | Q | C | L | P | H | E | L | V | A | D | I | Q | R | A | V | I | K | S | I | N | A | I | S | L |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |   |   |
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|   |
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|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
Alig confidence |   |
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| . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . |
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Template Conservation |   |
  |
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|   |   |   |
| . | . | . | . | . | . | . |   |
|   |   |   |
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|   |
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|   |   |   |
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|   |   |   | . | . | . | . | . | . | . |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
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Template Sequence |   |
Y | G | F | E | R | D | S | . |
. |
. |
. |
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. |
. |
V | I | L | L | E | Q | I | R | T | I | D | K | Q | R | L | T | D | K | . |
. |
. |
. |
. |
. |
. |
I | T | H | L | D | D | E | M | M | D | K | V | D | E | A | L | Q | I | S | L | A | L | I | D | F |
Template Known Secondary structure |   |
 | T |
| S | S |
|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  | . | . | . | . | . | . | . |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
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Template Predicted Secondary structure |   |
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|  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  | . | . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
67 | . | . | 70 | . | . | . | |
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. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
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. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . |
  |