Job Description P56259 Confidence 15.87% Date Thu Jan 5 12:06:21 GMT 2012 Rank 13 Aligned Residues 84 % Identity 23% Template d1fn9a_ SCOP info Outer capsid protein sigma 3 Outer capsid protein sigma 3 Outer capsid protein sigma 3 Resolution 1.80

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100											.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	P	P	E	M	I	K	N	R	L	V	V	V	L	N	G	K	I	N	G	N	A	C	I	V	V	P	L	S	T	T	R	D	Q	D	K	L	K	R	G	M	H	V	E	I	A	S	N	V	I	N	D	L	Q	F	F	D	Q	Q	I	R	W	A	K	.	.	.	.	.	.	.	.	.	.	A	D	L	V	Q
Query Conservation																																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																			.				.	.															.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation																			.				.	.															.	.
Template Sequence		S	A	Q	P	D	M	M	V	C	G	G	A	V	V	C	M	H	.	C	L	G	.	.	V	V	G	S	L	Q	R	K	L	K	H	L	P	H	.	.	H	R	C	N	Q	Q	I	R	H	Q	D	Y	V	D	V	Q	F	A	D	R	V	T	A	H	W	K	R	G	M	L	S	F	V	A	Q	M	H	E	M	M	N
Template Known Secondary structure						S					T	T					T	T	.	T	T		.	.					G	G	G	T			S				.	.
Template Predicted Secondary structure																			.				.	.															.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	S	R	N	R	L	N	R	A	R	T	Y	R	G	Y	L	N	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	S	P	D	D	L	D	R	V	R	T	E	G	G	S	L	V	E
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions