Job Description P58036 Confidence 3.20% Date Thu Jan 5 12:06:34 GMT 2012 Rank 10 Aligned Residues 58 % Identity 26% Template c3htuE_ PDB info PDB header:protein transport Chain: E: PDB Molecule:vacuolar protein-sorting-associated protein 25; PDBTitle: crystal structure of the human vps25-vps20 subcomplex Resolution 2.00 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.						.	.	60	.	.
Predicted Secondary structure																																																							.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.
Query Sequence		Y	V	N	S	N	K	T	T	S	L	P	V	E	L	D	A	L	N	N	K	D	I	S	Y	A	K	D	F	F	L	Y	I	E	T	Q	L	K	I	A	K	D	F	L	D	L	E	K	K	Y	Q	V	L	L	.	.	.	.	.	Q	V	K	F	F
Query Conservation																																																							.	.	.	.	.
Alig confidence																																																							.	.	.	.	.
Template Conservation
Template Sequence		W	V	S	R	S	G	Q	N	N	S	V	F	T	L	Y	E	L	T	N	G	E	D	T	E	D	E	E	F	H	G	L	D	E	A	T	L	L	R	A	L	Q	A	L	Q	Q	E	H	K	A	E	I	I	T	V	S	D	G	R	G	V	K	F	F
Template Known Secondary structure					T	S	S		S	S											S	G	G	G	T	T	S	T	T	T	T																T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions