Job Description P0A908 Confidence 3.98% Date Thu Jan 5 11:09:06 GMT 2012 Rank 53 Aligned Residues 58 % Identity 16% Template c3emoA_ PDB info PDB header:membrane protein/cell adhesion Chain: A: PDB Molecule:hia (adhesin); PDBTitle: crystal structure of transmembrane hia 973-1098 Resolution 3.00 Å

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		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200												.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.								.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.								.
Query Sequence		R	K	E	S	A	R	S	G	L	R	G	Y	N	P	N	D	S	W	S	P	Y	L	E	.	.	.	.	.	.	.	.	.	.	.	L	S	A	S	Y	N	F	.	L	G	D	W	S	V	Y	G	T	A	R	Y	T	R	L	S	D	E	V	T	D	S	P	M	V	D	K	S	W	T	G	L	I	S	T	G	I	T
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.								.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.								.													.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	S	A	L	A	A	S	Q	L	P	Q	A	T	M	P	G	K	S	M	V	A	I	A	G	S	S	Y	Q	G	Q	N	G	L	A	I	G	V	S	R	I	S	D	N	G	K	V	I	I	R	L	S	G	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	Q	G	K	T	G	V	A	A	G	V	G
Template Known Secondary structure									T						S	T	T												T	T													T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1029	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.														.	.	.	.	.	.	.	1090	.	.	.	.	.
		246	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	Q	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1096	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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