Job Description P0A908 Confidence 42.33% Date Thu Jan 5 11:09:06 GMT 2012 Rank 32 Aligned Residues 109 % Identity 10% Template c3efmA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:ferric alcaligin siderophore receptor; PDBTitle: structure of the alcaligin outer membrane recepteur faua from2 bordetella pertussis Resolution 2.33 Å

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		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	W	D	M	A	W	L	Y	R	Y	T	N	G	G	L	T	V	T	P	G	I	G	V	Q	W	N	S	E	N	Q	N	E	Y	Y	Y	G	V	S	R	K	E	S	A	R	S	G	L	R	G	Y	N	P	N	D	S	W	S	P	Y	L	E	L	S	A	S	Y	N	F	L	G	D	W	S	V	Y	G	T	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	K	S	Y	E	L	G	L	K	A	A	Y	L	E	G	R	L	N	T	S	A	A	L	F	Q	T	R	Q	D	N	L	A	Q	V	I	P	G	S	S	I	P	G	F	P	N	M	Q	A	S	R	A	A	S	G	A	K	V	E	G	I	D	L	E	A	S	G	Q	I	L	P	D	W	N	I	G	A	S	Y	T
Template Known Secondary structure															G	G	G	T														S						T	T				T	T	S	S	S	S																								T	T
Template Predicted Secondary structure
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	T	R	L	S	D	E	V	T	D	S	P	M	V	D	K	S	W	T	G	L	I	S	T	G	I	T	Y	K	F
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		H	F	T	.	T	K	D	A	S	G	N	P	I	N	T	N	H	P	R	S	L	F	K	L	Y	T	T	Y	R	L
Template Known Secondary structure					.				T	T	S		B				S	S		S
Template Predicted Secondary structure					.
Template SS confidence
		541	.	.		.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions