Job Description P0A908 Confidence 89.01% Date Thu Jan 5 11:09:06 GMT 2012 Rank 20 Aligned Residues 183 % Identity 13% Template c3dwoX_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:probable outer membrane protein; PDBTitle: crystal structure of a pseudomonas aeruginosa fadl homologue Resolution 2.20 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	F	W	F	R	G	L	G	G	G	Y	Y	L	W	N	D	A	T	D	K	L	S	I	T	A	Y	W	S	P	L	Y	F	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	S	G	D	H	Q	M	R	H	L	D	D	R	K	S	T	M	M	A	G	L	S	Y	A
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	I	E	T	I	G	L	T	G	S	L	S	F	K	V	N	D	N	F	S	L	G	A	G	V	I	I	Q	R	T	S	G	F	V	S	Q	N	L	D	L	Y	A	S	A	A	N	S	P	G	M	G	G	I	P	F	P	A	S	N	S	S	A	L	M	R	V	K	V	D	N	T	S	P	G	F	F	A	G	A	V
Template Known Secondary structure																S	S	S	S																												T	S	T	T	T		S	S				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
		117	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140																																										.	.	.	.	.	.	.	.	.	150	.	.		.
Predicted Secondary structure				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		H	F	.	T	Q	Y	G	Y	L	R	T	T	L	A	G	D	T	L	D	N	S	N	G	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	D	M	A	W	L	Y	R	Y	T	N	G	.	G
Query Conservation				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		W	K	P	T	D	R	D	T	L	G	F	A	Y	H	A	K	I	R	N	K	L	K	G	H	Y	N	L	Y	D	H	D	G	G	L	T	E	G	A	I	E	G	G	T	P	G	L	A	Y	P	G	L	D	L	R	M	G	A	S	A	S	A	R	L	D	I	P	A	Y	A	S	L	D	W	V	H	Q	F	N	D	R
Template Known Secondary structure				S	S	S	S											B														S	T	T								T	T						S	T	T					S										B													S	S	S
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230
Predicted Secondary structure																																												.	.																													.
Query SS confidence																																												.	.																													.
Query Sequence		L	T	V	T	P	G	I	G	V	Q	W	N	S	E	N	Q	N	E	Y	Y	Y	G	V	S	R	K	E	S	A	R	S	G	L	R	G	Y	N	P	N	D	S	W	.	.	S	P	Y	L	E	L	S	A	S	Y	N	F	L	G	D	W	S	V	Y	G	T	A	R	Y	T	R	L	S	.	D	E	V	T	D	S	P
Query Conservation																																												.	.																													.
Alig confidence															.	.	.	.	.	.	.	.																						.	.																													.
Template Conservation															.	.	.	.	.	.	.	.
Template Sequence		L	S	L	G	A	S	A	T	W	T	E	W	S	.	.	.	.	.	.	.	.	S	F	Q	D	L	T	L	K	S	H	G	N	T	I	V	S	I	P	Y	T	Y	R	N	T	W	T	L	A	V	G	G	D	Y	K	V	T	D	Q	W	T	M	R	A	G	V	A	Y	D	Q	T	P	T	H	N	A	T	R	D	P
Template Known Secondary structure													G	G	.	.	.	.	.	.	.	.	G									T	T																								S	S	S	S													S			T	T	T			S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.									.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	D	K	S	W	T	G	L	I	S	T	G	I	T	Y	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	I	P	D	G	D	R	Y	F	A	S	L	G	A	G	Y	R	F
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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