Return to main results Retrieve Phyre Job Id

Job DescriptionP0A908
Confidence69.05%DateThu Jan 5 11:09:06 GMT 2012
Rank28Aligned Residues138
% Identity13%Templatec3brzA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:todx; PDBTitle: crystal structure of the pseudomonas putida toluene2 transporter todx
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   104.....110.........120.........130.........140 .........150.. .......160........
Predicted Secondary structure 














..............

.



Query SS confidence 




































. . . . . . . . . . . . . .











.















Query Sequence  DRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIV. . . . . . . . . . . . . . WDMAWLYRYTNG. GLTVTPGIGVQWNSEN
Query Conservation 

      
                  

     
  ..............            .   
         
  
Alig confidence 




































..............











.















Template Conservation          
 

 
                                    
     
          
  
     

  
Template Sequence  KLTDNTVLGAMYNFKTSVGDLEGKATLSAISGDGAVLPLDGDIRVKNFEMPASLTLGLAHQFNERWVVAADIKRAYWGDV
Template Known Secondary structure 
SSS

B




TTS



B

SSSS

TT
Template Predicted Secondary structure 

































Template SS confidence 















































































   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   169170.........180.........190.........200.........210.........220.........230.........240........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  QNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTRLSDEVTDSPMVDKSWTGLISTGITYKF
Query Conservation     




   
 
 
    
    
      
   
 
   
          
     




          
  
 
Alig confidence 

































..



















.....


















Template Conservation                          
      
 
..
       




 

 

 .....   
       
 
 
   
Template Sequence  MDSMNVAFISQLGGIDVALPHRYQDITVASIGTA. . YKYNNDLTLRAGYSYAQLIL. . . . . PVIPAYLKRHVTFGGEYDF
Template Known Secondary structure 
S
SS





..
SSSS



.....TTS



S

S
Template Predicted Secondary structure 





















..








.....







Template SS confidence 















































































   308.310.........320.........330.........340. ........350.........360. ........370.........380
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions