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Job DescriptionP0A908
Confidence98.00%DateThu Jan 5 11:09:06 GMT 2012
Rank7Aligned Residues161
% Identity17%Templatec2x4mD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:coagulase/fibrinolysin; PDBTitle: yersinia pestis plasminogen activator pla
Resolution2.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   64.....70.........80.........90........ .100.........110.........120.........130.........140..
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Query Sequence  LGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQ. MRHLDDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWD
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Template Sequence  LNVKGWLLQDENYKAGITAGYQETRFSWTATGGSYSYNNGAYTGN. . . . . . . . . . . FPKGVRVIGYNQRF. . . . . . SMPY
Template Known Secondary structure  S


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   114.....120.........130.........140.........150........ .160.........170.. ....
 
   143......150.........160..... ....170.........180.........190.........200.........210.........220.
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Query Sequence  MAWLYRYTNGGLTVTPGIGVQWN. SENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTARYTR
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Template Sequence  IGLAGQYRINDFELNALFKFSDWVRAHDNDEHY. . . . . . . MRDLTFREKTSGSRYYGTVINAGYYVTPNAKVFAEFTYSK
Template Known Secondary structure  TTG.......GGTTT
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   177..180.........190.........200......... 210.........220.........230.........240.........
 
   222.......230...... .. .240........
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Query Sequence  LSDEVTDSPMVDKSW. . . . TG. . . . . . . . . . . . LISTGITYKF
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Template Sequence  YDEGKGGTQTIDKNSGDSVSIGGDAAGISNKNYTVTAGLQYRF
Template Known Secondary structure  TTT

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   250.........260.........270.........280.........290..
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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