Job Description P0A908 Confidence 98.93% Date Thu Jan 5 11:09:06 GMT 2012 Rank 1 Aligned Residues 194 % Identity 17% Template c2x27X_ PDB info PDB header:membrane protein Chain: X: PDB Molecule:outer membrane protein oprg; PDBTitle: crystal structure of the outer membrane protein oprg from2 pseudomonas aeruginosa Resolution 2.40 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		G	V	A	H	A	E	G	K	F	S	L	G	A	G	V	G	V	V	E	H	P	Y	K	D	Y	D	T	D	V	Y	.	.	P	V	P	V	I	N	Y	E	G	D	N	F	W	F	R	G	L	G	G	G	Y	Y	L	W	N	D	A	T	D	K	L	S	I	T	A	Y	W	S	P	L	Y	F	K	A	K	D	S	G
Query Conservation																																.	.
Alig confidence																																.	.																								.	.
Template Conservation																																																									.	.
Template Sequence		I	Q	G	H	K	A	G	D	F	I	I	R	G	G	F	A	T	V	D	P	D	D	S	S	S	D	I	K	L	D	G	A	K	Q	R	G	T	K	A	T	V	D	S	D	T	Q	L	G	L	T	F	T	Y	M	F	.	.	A	D	K	W	G	V	E	L	V	A	A	T	P	F	N	H	Q	V	D	V	K	G	L
Template Known Secondary structure			S	S			T	T																							T	T				T	T																			S	.	.	S	S	S									S
Template Predicted Secondary structure																																																									.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	Q	M	R	H	L	D	D	R	K	S	T	M	M	A	G	L	S	Y	A	H	F	T	Q	Y	G	Y	L	R	T	T	L	A	G	D	T	L	D	N	S	N	G	I	V	W	D	M	A	W	L	Y	R	Y	T	N	G	G	L	T	V	T	P	G	I	G	V	Q	W	N	S	E	N	Q	N	E	Y	Y	Y	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Sequence		L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	G	K	L	A	D	I	K	Q	L	P	P	T	L	L	L	Q	Y	Y	P	M	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	N	S	A	F	Q	P	Y	G	G	L	G	V	N	Y	T	T	F	F	D	E	D	L	.	.	.
Template Known Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																				T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S																				.	.	.
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template SS confidence
		83															.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.											230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		V	S	R	K	E	S	A	R	S	G	L	R	G	Y	N	P	N	D	S	W	S	P	Y	L	E	L	S	A	S	Y	N	F	L	G	D	W	S	V	Y	G	T	A	R	Y	T	R	L	S	D	E	V	T	D	S	.	.	.	.	.	.	.	.	.	.	P	M	V	D	K	S	W	T	G	L	I	S	T	G	I	T
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	A	S	N	R	K	A	Q	G	F	S	S	M	K	L	Q	D	S	W	G	L	A	G	E	L	G	F	D	Y	M	L	N	E	H	A	L	F	N	M	A	V	W	Y	M	D	I	D	T	K	A	S	I	N	G	P	S	A	L	G	V	N	K	T	K	V	D	V	D	V	D	P	W	V	Y	M	I	G	F	G
Template Known Secondary structure		.	.							T	T																						S	S	S	S																						T	T	T	T		S
Template Predicted Secondary structure		.	.
Template SS confidence
				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		246	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	K	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		208	.	210

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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