Job Description P0A908 Confidence 2.54% Date Thu Jan 5 11:09:06 GMT 2012 Rank 65 Aligned Residues 181 % Identity 15% Template c2qdzA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:tpsb transporter fhac; PDBTitle: structure of the membrane protein fhac: a member of the2 omp85/tpsb transporter family Resolution 3.15 Å

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		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.
Predicted Secondary structure																																																																														.	.	.
Query SS confidence																																																																														.	.	.
Query Sequence		G	L	G	G	G	Y	Y	L	W	N	D	A	T	D	K	L	S	I	T	A	Y	W	S	P	L	Y	F	K	A	K	D	S	G	D	H	Q	M	R	H	L	D	D	R	K	S	T	M	M	A	G	L	S	Y	A	H	F	T	Q	Y	G	Y	L	R	T	T	L	A	G	D	T	L	D	N	S	N	G	.	.	.	I
Query Conservation																																																																														.	.	.
Alig confidence																									.																																																					.	.	.
Template Conservation																									.
Template Sequence		G	L	K	A	T	R	L	L	Y	R	D	T	R	S	Q	F	S	V	Y	G	G	L	K	.	L	R	Q	N	K	N	Y	L	A	G	T	R	L	D	V	S	S	K	H	Y	S	D	V	T	V	G	M	Q	Y	S	T	Q	R	G	A	N	A	Y	F	G	D	L	S	F	T	R	G	V	G	V	G	N	V	S	R	F
Template Known Secondary structure													S	S											.										T	T	S																						S	S
Template Predicted Secondary structure																									.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.			.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.								.
Predicted Secondary structure															.	.																		.																												.												.	.	.	.	.	.	.
Query SS confidence															.	.																		.																												.												.	.	.	.	.	.	.
Query Sequence		V	W	D	M	A	W	L	Y	R	Y	T	N	G	.	.	G	L	T	V	T	P	G	I	G	V	Q	W	N	S	E	N	Q	.	N	E	Y	Y	Y	G	V	S	R	K	E	S	A	R	S	G	L	R	G	Y	N	P	N	D	S	W	S	.	P	Y	L	E	L	S	A	S	Y	N	F	.	.	.	.	.	.	.	L
Query Conservation															.	.																		.																												.												.	.	.	.	.	.	.
Alig confidence															.	.																		.															.													.												.	.	.	.	.	.	.
Template Conservation																																																	.
Template Sequence		N	G	S	L	A	W	T	R	Y	M	A	L	A	G	Q	P	I	Q	W	A	S	Q	L	G	F	Q	Y	S	R	Q	Q	L	L	N	S	Y	Q	I	T	V	G	D	E	Y	T	V	R	.	G	Y	N	L	R	T	S	Q	S	G	D	S	G	V	Y	L	S	N	T	L	T	V	P	V	Q	F	S	L	L	G	K	Q
Template Known Secondary structure														T	T															S	S		S	S	S	S					S							T	.	T						S			S	S		S	S					S
Template Predicted Secondary structure																																																	.
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450		.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	W	S	V	Y	G	T	A	R	Y	T	R	L	S	D	E	V	T	D	S	P	M	V	D	K	S	W	T	G	L	I	S	T	G	I	T	Y	K	F
Query Conservation
Alig confidence																							.	.	.
Template Conservation																							.	.	.
Template Sequence		A	S	V	A	P	F	V	G	A	D	V	G	A	L	K	S	N	H	P	D	A	.	.	.	R	T	I	R	M	A	G	L	A	A	G	V	R	F	D	L
Template Known Secondary structure		S	S															S	S	S	S		.	.	.
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		483	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.				.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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