Job Description P39391 Confidence 9.40% Date Thu Jan 5 12:00:24 GMT 2012 Rank 27 Aligned Residues 51 % Identity 27% Template c3cuoB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav; PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli Resolution 2.00 Å

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		13	.	.	.			.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																										.	.
Query SS confidence						.	.																										.	.
Query Sequence		K	E	L	A	.	.	L	G	Q	S	E	Y	I	S	W	V	K	C	T	S	W	L	S	N	F	V	N	L	R	G	L	.	.	R	Q	P	D	G	R	P	L	Y	E	Y	H	A	T	N	D	E	Y	T	Q	L	T	Q	L	L	R	A	V
Query Conservation						.	.																										.	.
Alig confidence						.	.									.	.	.	.	.													.	.										.
Template Conservation																.	.	.	.	.																								.
Template Sequence		G	E	L	T	R	I	T	G	L	S	A	S	A	T	.	.	.	.	.	S	Q	H	L	A	R	M	R	D	E	G	L	I	D	S	Q	R	D	A	Q	R	I	L	.	Y	S	I	K	N	E	A	V	N	A	I	I	A	T	L	K	N	V
Template Known Secondary structure																.	.	.	.	.											T	S							S	S				.
Template Predicted Secondary structure																.	.	.	.	.																								.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions