Job Description P39391 Confidence 10.76% Date Thu Jan 5 12:00:24 GMT 2012 Rank 21 Aligned Residues 104 % Identity 16% Template c2vbeA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:tailspike-protein; PDBTitle: tailspike protein of bacteriophage sf6 Resolution 1.98 Å

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		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.					.	.	.	.	.	.			430	.	.	.		.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.			.	.	.
Predicted Secondary structure																						.	.	.	.							.	.					.																																							.	.
Query SS confidence																						.	.	.	.							.	.					.																																							.	.
Query Sequence		A	D	Q	W	L	L	Q	G	Q	A	S	C	S	V	R	S	S	D	V	L	.	.	.	.	I	V	L	P	R	D	.	.	N	S	N	V	.	A	G	F	D	G	Q	S	R	A	V	N	V	L	G	L	K	A	L	P	V	K	G	C	Q	D	V	T	V	T	A	N	E	T	Y	R	I	R	T	.	.	G	R	E
Query Conservation																						.	.	.	.							.	.					.																																							.	.
Alig confidence																						.	.	.	.							.	.					.																																							.	.
Template Conservation
Template Sequence		N	K	P	L	R	Y	L	R	S	G	G	V	S	V	T	D	C	Y	L	A	G	I	T	E	V	Q	K	P	E	G	R	Y	N	T	Y	R	G	C	S	G	V	P	S	V	N	G	I	I	N	V	P	V	A	V	G	A	T	S	G	S	A	A	I	P	N	P	G	N	L	T	Y	R	V	R	S	L	F	G	D	P
Template Known Secondary structure		S	S						S								S										S			T	T							S					S												T	T		S							S	S			S	S										S	G
Template Predicted Secondary structure
Template SS confidence
		508	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	S	I	G	R	F	A	L	N	G	K	R	A	S	W	V	C	H	P	D	E	T	F	I	G	V	P	K	V	I	S	T	L
Query Conservation
Alig confidence																	.
Template Conservation																	.
Template Sequence		A	S	S	G	D	K	V	S	V	S	G	V	T	I	N	.	V	T	R	P	S	P	V	G	V	A	L	P	S	X	V	E	Y	L
Template Known Secondary structure		G	G	T	T							T	T				.				S	S			S	S
Template Predicted Secondary structure																	.
Template SS confidence
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.		.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions