Job Description P06974 Confidence 9.03% Date Thu Jan 5 10:59:40 GMT 2012 Rank 38 Aligned Residues 61 % Identity 25% Template c2uzhB_ PDB info PDB header:lyase Chain: B: PDB Molecule:2c-methyl-d-erythritol 2,4-cyclodiphosphate PDBTitle: mycobacterium smegmatis 2c-methyl-d-erythritol-2,4-2 cyclodiphosphate synthase (ispf) Resolution 2.2 Å

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		2	.		.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30																																.	.	.	.	.	.	.	.	.	40	.	.	.	.
Predicted Secondary structure				.																				.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.																				.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	D	.	S	I	L	S	Q	A	E	I	D	A	L	L	N	G	D	S	E	V	K	.	.	.	.	.	D	E	P	T	A	S	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	S	D	I	R	P	Y	D	P	N	T	Q	R
Query Conservation				.																				.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.																				.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		S	D	G	D	V	A	A	H	A	L	C	D	A	L	L	S	A	A	G	L	G	D	L	G	T	I	F	G	T	D	R	P	Q	W	R	G	A	S	G	A	D	M	I	R	H	V	R	G	L	V	E	N	A	G	F	V	I	G	N	A	T	V	Q	V	I	G	N	R	P	K	V	G	P	R	R	.	.	.	.	.
Template Known Secondary structure																			T	T										S	S		G	G	G	T	T																	T	T												S	S	S	S			G	G	G		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	V	R	E	R	L	Q	A	L	E	I	I	N	E	R	F	A	R	H	F	R	M	G	L	F	N	L	L	R	R	S	P	D	I	T	V	G	A	I	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	A	Q	Q	V	L	S	E	L	V	G	A	P	V	S	V	S	A	T	T	T	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	S										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions