Job Description P06974 Confidence 100.00% Date Thu Jan 5 10:59:40 GMT 2012 Rank 1 Aligned Residues 179 % Identity 26% Template c2hp7A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:flagellar motor switch protein flim; PDBTitle: structure of flim provides insight into assembly of the2 switch complex in the bacterial flagella motor Resolution 2.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	R	V	V	R	E	R	L	Q	A	L	E	I	I	N	E	R	F	A	R	H	F	R	M	G	L	F	N	L	L	R	R	S	P	D	I	T	V	G	A	I	R	I	Q	P	Y	H	E	F	A	R	N	L	P	V	P	T	N	L	N	L	I	H	L	K	P	L	R	G	T	G	L	V	V	F	S	P	S	L
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		P	S	K	F	S	K	E	Q	L	R	T	F	Q	M	I	H	E	N	F	G	R	A	L	S	T	Y	L	S	G	R	L	R	T	F	V	D	V	E	I	.	S	I	D	Q	L	T	Y	E	E	F	I	R	S	V	M	I	P	S	F	I	V	I	F	T	G	D	V	F	E	G	S	A	I	F	E	M	R	L	D	L
Template Known Secondary structure				S																													T	S							.														S		S	S									T	T		S	S
Template Predicted Secondary structure																																									.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	I	A	V	D	N	L	F	G	G	D	G	R	F	P	T	K	V	E	G	R	E	F	T	H	T	E	Q	R	V	I	N	R	M	L	K	L	A	L	E	G	Y	S	D	A	W	K	A	I	N	P	L	E	V	E	Y	V	R	S	E	M	Q	V	K	F	T	N	I	T	T	S	P	N	D	I	V	V	N	T
Query Conservation
Alig confidence															.	.	.	.	.	.	.																																																		.
Template Conservation															.	.	.	.	.	.	.																																																		.
Template Sequence		F	Y	T	M	L	D	I	I	M	G	G	P	P	.	.	.	.	.	.	.	N	R	P	P	T	E	I	E	T	S	I	M	R	K	E	V	T	N	M	L	T	L	L	A	Q	A	W	S	D	F	Q	Y	F	I	P	S	I	E	N	V	E	T	N	P	Q	F	V	Q	I	.	V	P	P	N	E	I	V	L	L	V
Template Known Secondary structure											T				.	.	.	.	.	.	.		S																									T															S		G	G	G			S	.	S		T	T	S
Template Predicted Secondary structure															.	.	.	.	.	.	.																																																		.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	H	V	E	I	G	N	L	T	G	E	F	N	I	C	L	P	F	S	M	I	E	P	L	R	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	S	V	S	W	G	E	F	T	S	F	I	N	V	C	W	P	F	S	L	L	E	P	L	L	E	K
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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