Job Description P31545 Confidence 4.92% Date Thu Jan 5 11:48:05 GMT 2012 Rank 66 Aligned Residues 55 % Identity 16% Template d1h8ta_ SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4) Resolution 2.90

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		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.																						.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	L	D	M	G	L	L	F	V	C	Y	Q	H	D	L	E	K	G	F	L	T	V	Q	K	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	E	A	L	E	E	Y	V	K	P	I	G	G	G	Y	F	F	A	L	P	G	V	K	D	A	N	D	Y
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.
Template Sequence		T	N	S	D	Q	T	K	L	F	A	S	W	T	I	S	A	.	R	R	M	V	Q	M	R	R	K	L	E	I	F	T	Y	V	R	F	D	V	E	V	T	F	V	I	T	S	K	Q	D	Q	G	T	Q	L	G	Q	D	M	P	P	L	T	H	Q	I	M	Y	I	P	P	G	G	P	I	P	K	S	V
Template Known Secondary structure		S		S	S	S	G	G	G								S	.		S	S								T	T																						S																		T	T	S					S	T
Template Predicted Secondary structure																		.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions