Phyre 2 alignment of P31545 with d1ev11

Job Description P31545
Confidence 4.71% Date Thu Jan 5 11:48:05 GMT 2012

Rank 69 Aligned Residues 55

% Identity 11% Template d1ev11_

SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Picornaviridae-like VP (VP1, VP2, VP3 and VP4)

Resolution 3.55

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.																						.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	G	Q	L	D	M	G	L	L	F	V	C	Y	Q	H	D	L	E	K	G	F	L	T	V	Q	K	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	E	A	L	E	E	Y	V	K	P	I	G	G	G	Y	F	F	A	L	P	G	V	K	D	A	N	D	Y
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.
Template Sequence	G	T	K	E	D	S	N	S	F	N	N	W	V	I	T	T	R	R	.	V	A	Q	L	R	R	K	L	E	M	F	T	Y	L	R	F	D	M	E	I	T	V	V	I	T	S	S	Q	D	Q	S	T	S	Q	N	Q	N	A	P	V	L	T	H	Q	I	M	Y	V	P	P	G	G	P	I	P	V	S	V
Template Known Secondary structure			T	T		G	G	G								G	G	G	.	S	S							T	T																					S	T	T	T	T															T	T	S					S	T
Template Predicted Secondary structure																			.
Template SS confidence
	82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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