Job Description P77182 Confidence 98.48% Date Thu Jan 5 12:26:05 GMT 2012 Rank 239 Aligned Residues 159 % Identity 19% Template d1uira_ SCOP info S-adenosyl-L-methionine-dependent methyltransferases S-adenosyl-L-methionine-dependent methyltransferases Spermidine synthase Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	T	P	V	S	R	D	F	D	D	V	Y	F	S	N	D	N	G	L	E	E	T	R	Y	V	F	L	G	G	N	Q	L	E	V	R	F	P	E	H	P	H	P	L	F	V	V	A	E	S	G	F	G	T	G	L	N	F	L	T	L	W	Q	A	F	D	Q	F	R	E	A	H	P	Q	A	Q	L	Q	R	L
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		D	K	D	V	Q	S	T	E	R	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	I	Y	H	E	T	L	V	H	P	A	M	L	T	H	P	E	P	K	R	V	L	I	V	G	G	G	E	G	.	.	.	.	A	T	L	R	E	V	L	K	H	P	T	V	.	.	.	.	.	.	.	.	E
Template Known Secondary structure		T	T						T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															S	S											T	T	S	.	.	.	.							T	T	S	T	T		.	.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60																.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.									.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	I	S	F	E	K	F	P	L	T	R	A	D	L	A	L	A	H	Q	H	W	P	E	L	A	P	W	A	E	Q	L	Q	A	Q	W	P	M	P	L	P	G	C	H	R	L	L	L	D	E	G	R	V	T	L	D	L	W	F	G	D	I	N	E	L	T	S	Q	L	D	D	S	L	N	Q	K	V	D	A	W
Query Conservation
Alig confidence								.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													.	.	.	.
Template Conservation								.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													.	.	.	.
Template Sequence		K	A	V	M	V	D	.	.	.	I	D	G	E	L	V	E	V	A	K	R	H	M	P	E	W	H	Q	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	D	D	P	R	A	V	.	.	L	V	I	D	D	A	R	A	Y	L	E	R	.	.	.	.	T	E	E	R	Y	D	V	V
Template Known Secondary structure								.	.	.	S																	T	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G		T	T			.	.				S									.	.	.	.
Template Predicted Secondary structure								.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.													.	.	.	.
Template SS confidence
		103	.	.	.	.	.				.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																			.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.					.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.							.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																															.	.	.	.	.	.
Query SS confidence												.	.	.	.																															.	.	.	.	.	.
Query Sequence		F	L	D	G	F	A	P	A	K	N	.	.	.	.	P	D	M	W	T	Q	N	L	F	N	A	M	A	R	L	A	R	P	G	G	T	L	A	T	F	T	S	A	G	F	.	.	.	.	.	.	V	R	R	G	L	Q	D	A	G	F	T	M	Q
Query Conservation												.	.	.	.																															.	.	.	.	.	.
Alig confidence												.	.	.	.																															.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	D	L	T	D	P	V	G	E	D	N	P	A	R	L	L	Y	T	V	E	F	Y	R	L	V	K	A	H	L	N	P	G	G	V	M	G	M	Q	T	G	M	I	L	L	R	V	H	P	V	V	H	R	T	V	R	E	A	F	R	Y	V	R
Template Known Secondary structure									B	S	T	T		G	G	G	G	G	S	S										T																												T	T		S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions