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Job DescriptionP77182
Confidence98.89%DateThu Jan 5 12:26:05 GMT 2012
Rank158Aligned Residues203
% Identity13%Templated1kdga1
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain FAD-linked reductases, N-terminal domain
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   263......270.........280.........290......
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Query Sequence  SKREAAIIGGGIASALLSLALLRRGWQVTLYCAD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGPSTKQTGGTYVAPWATSSGLTKFDIPGLFESLFTDSNPFWWCKDI
Template Known Secondary structure 



STT


SS


SGGGT




GGGGGGT

TTT
GGGGGGGGT
S

TTB
TT
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   215....220.........230.........240.........250.........260.........270.........280.........290....
 
   297..300.........310.........320..... ....330.........340.........350.........360.........
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Query Sequence  . . . . EAPALGASGNRQGALYPLLSKHDEALNRF. . . FSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLS
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Template Conservation      
   

 
        
    
             
       
                               
Template Sequence  TVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGWPSSWTNHAPYTSKLSSRLPSTDHPSTDGQRYLEQSFNVVSQLLKGQG
Template Known Secondary structure  SS

B
STTGGGGTS

B




GGGG
GGGT

GGGS

S

BS

STTS


S
TTT
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   295....300.........310.........320.........330.........340.........350.........360.........370....
 
   370.........380.........390.........400.........410.........420.........430.........440.....
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Query Sequence  MDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLN. . . .
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Template Sequence  YNQATINDNPNYKDHVFGYSAFDFLNGKRA. . . . . . . . . GPVATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTND
Template Known Secondary structure 


GGGSTT

TT



B
TT
.........TT
TT
S

TTS
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   375....380.........390.........400.... .....410.........420.........430.........440.....
 
   446...450.........460... ......470....
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Query Sequence  . . . . . FAGDQQATHSVVVLANGH. QISRFSQTSTL
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Template Sequence  PTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGI
Template Known Secondary structure  TTSSGGG
STTB
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   446...450.........460.........470.........480
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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