 |
Job Description | P77182 | Confidence | 99.05% | Date | Thu Jan 5 12:26:05 GMT 2012 |
Rank | 121 | Aligned Residues | 91 |
% Identity | 14% | Template | d1c0pa2 |
SCOP info | FAD-linked reductases, C-terminal domain
| FAD-linked reductases, C-terminal domain
| D-aminoacid oxidase-like
|
Resolution | 1.20 |
|
 |
  |   |
477 | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | |
500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  | . |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Query Sequence |   |
Y | S | V | A | G | Q | V | S | H | I | P | T | T | P | E | L | A | E | L | K | Q | V | L | . |
C | Y | D | G | Y | L | T | P | Q | N | P | A | N | Q | H | H | C | I | G | A | S | Y | H | R | G | S | E | D | T | A | Y | S | E | D | D | Q | Q | Q | N | R | Q | R | L | I | D | C | F | P | Q | A | Q | W | A | K | E | . |
Query Conservation |   |
  |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
| . |   |   |   |
|
|   |   |
|   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |   |   |   | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|
|
|
|
|
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
| . | . |   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
E | P | I | R | G | Q | T | V | L | V | K | S | P | C | K | R | C | T | M | D | S | S | D | P | A | S | P | A | Y | I | I | P | R | . |
. |
P | G | G | E | V | I | C | G | G | T | Y | G | V | G | D | W | D | L | S | V | N | P | E | T | V | Q | R | I | L | K | H | C | L | R | L | D | P | T | I | S | S | D | G | T | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
| S |
| T | T |
|
|  |  |  |  |  |  | . | . | T | T | T |  |  |  |  |  |
|
|
|  |  | T |
|
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | S | S | S | S | S | G |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1195 | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | |
|
. | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 | . | . | . | . | . | . | . | . | . | 1270 | . | . |
  |
  |   |
555 | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | V | S | D | K | E | A | R | C | G | V | R | C | A |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |   |
|
|
|
|
|   |
Template Sequence |   |
E | G | I | E | V | L | R | H | N | V | G | L | R | P | A |
Template Known Secondary structure |   |
G | G |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1273 | . | . | . | . | . | . | 1280 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|