Job Description P77182 Confidence 97.45% Date Thu Jan 5 12:26:05 GMT 2012 Rank 341 Aligned Residues 130 % Identity 15% Template c3p2kA_ PDB info PDB header:transferase Chain: A: PDB Molecule:16s rrna methylase; PDBTitle: structure of an antibiotic related methyltransferase Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	A	E	S	G	F	G	T	G	L	N	F	L	T	L	W	Q	A	F	D	Q	F	R	E	A	H	P	Q	A	Q	L	Q	R	L	H	F	I	S	F	E	K	F	P	L	T	R	A	D	L	A	L	A	H	Q	H	W	P	E	L	A	P	W	A	E	Q	L	Q	A	Q	W	P	M	P	L	P	G	C	H	R
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	I	D	L	G	T	G	D	G	R	N	I	Y	K	L	A	I	N	D	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	T	F	Y	I	G	I	D	.	.	.	P	V	K	E	N	L	F	D	I	S	K	K	I	I	K	K	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							T		T	T	S											T	T	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	S		G	G	G	G								T	S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.													.	50	.	.	.	.	.				.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.							.
Predicted Secondary structure																																																.	.																										.	.	.	.	.	.
Query SS confidence																																																.	.																										.	.	.	.	.	.
Query Sequence		L	L	L	D	E	G	R	V	T	L	D	L	W	F	G	D	I	N	E	L	T	S	Q	L	D	D	S	L	N	Q	K	V	D	A	W	F	L	D	G	F	A	P	A	K	N	P	.	.	D	M	W	T	Q	N	L	F	N	A	M	A	R	L	A	R	P	G	G	T	L	A	T	F	T	.	.	.	.	.	.	S
Query Conservation																																																.	.																										.	.	.	.	.	.
Alig confidence		.	.	.																									.	.	.	.																.	.																										.	.	.	.	.	.
Template Conservation		.	.	.																									.	.	.	.
Template Sequence		.	.	.	K	G	G	L	S	N	V	V	F	V	I	A	A	A	E	S	L	P	F	E	L	K	N	I	.	.	.	.	A	D	S	I	S	I	L	F	P	W	G	T	L	L	E	Y	V	I	K	P	N	R	D	I	L	S	N	V	A	D	L	A	K	K	E	A	H	F	E	F	V	T	T	Y	K	A	Y	F	L
Template Known Secondary structure		.	.	.	G	T			S	S								T	T	S			G	G	G	T	T		.	.	.	.								S											T	T											T
Template Predicted Secondary structure		.	.	.																									.	.	.	.
Template SS confidence
					74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.					.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	F	V	R	R	G	L	Q	D	A	G	F	T	M	Q	K	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	E	Q	Y	K	A	E	L	S	N	S	G	F	R	I	D	D	V
Template Known Secondary structure		S									T	T	T
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions