Job Description P77182 Confidence 99.42% Date Thu Jan 5 12:26:05 GMT 2012 Rank 56 Aligned Residues 347 % Identity 17% Template c3lovA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protoporphyrinogen oxidase; PDBTitle: crystal structure of putative protoporphyrinogen oxidase2 (yp_001813199.1) from exiguobacterium sp. 255-15 at 2.06 a resolution Resolution 2.06 Å

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		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.						.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.																												.	.	.	.	.																.	.	.	.	.
Query SS confidence																												.	.																												.	.	.	.	.																.	.	.	.	.
Query Sequence		G	S	S	K	R	E	A	A	I	I	G	G	G	I	A	S	A	L	L	S	L	A	L	L	R	R	.	.	G	W	Q	V	T	L	Y	C	A	D	E	A	P	A	L	G	A	S	G	N	R	Q	G	A	L	Y	P	.	.	.	.	.	L	L	S	K	H	D	E	A	L	N	R	F	F	S	N	.	.	.	.	.
Query Conservation																												.	.																												.	.	.	.	.																.	.	.	.	.
Alig confidence																												.	.																												.	.	.	.	.																.	.	.	.	.
Template Conservation
Template Sequence		G	X	S	S	K	R	L	V	I	V	G	G	G	I	T	G	L	A	A	A	Y	Y	A	E	R	A	F	P	D	L	N	I	T	L	L	E	A	G	E	R	L	G	G	K	V	A	T	Y	R	E	D	G	F	T	I	E	R	G	P	D	S	Y	V	A	R	K	H	I	L	T	D	L	I	E	A	I	G	L	G	E
Template Known Secondary structure					S									B															T	T	S							S	S	S	S	S	B	T	T						S	T	T					S	S						T	T	S	T									T	T		G	G
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
																																															329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	T	F	A	R	R	F	Y	D	Q	L	P	V	K	F	D	H	D	W	C	G	V	T	Q	L	G	W	D	E	K	S	Q	H	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	V	R	N	N	T	S	Q	A	F	I	L	D	T	G	G	L	H	P	I	P	K	G	A	V	X	G	I	P	T	D	L	D	L	F	R	Q	T	T	L	L	T	E	E	E	K	Q	E	V	A	D	L	L	L	H	P	S	D	S	L	R	I	P	E	Q	D	I	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		G														T	T							S	S			T	T			S						T	T		S	S	S														S			T	T					S	S			B	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.																								.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	Q	M	L	S	M	D	L	P	A	E	L	A	V	A	V	E	A	N	A	V	E	Q	I	T	G	V	A	T	N	C	S	G	I	T	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	G	G	W	L	C	P	A	E	L	T	R	N	V	L	E	L	A	Q
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	E	Y	L	R	P	R	L	G	D	A	L	V	E	K	L	I	E	P	L	L	S	G	I	Y	A	G	N	I	D	Q	X	S	T	F	A	T	Y	P	Q	F	V	A	N	E	Q	K	A	G	S	L	F	E	G	X	R	L	X	R	P	T	G	Q	F	L	S	L	E	T	G	L	E	S	L	I	E	R	L	E
Template Known Secondary structure																		T							G	G	G				T	T	T	S	B	S	T	T	T												S	S								T					S					T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		421	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		Q	Q	G	L	.	.	Q	I	Y	Y	Q	Y	Q	L	Q	N	L	S	R	K	D	D	C	W	L	L	N	F	A	G	D	Q	Q	A	T	H	S	V	V	V	L	A	N	G	H	Q	I	S	R	F	S	Q	T	S	T	L	P	V	Y	S	V	A	G	Q	V	S	H	I	P	T	T	P	E	L	A	E	L	K	Q	V
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		E	V	L	E	R	S	E	I	R	L	E	T	P	L	L	A	I	S	R	E	D	G	R	Y	R	L	K	T	D	H	G	P	E	Y	A	D	Y	V	L	L	T	I	P	H	P	Q	V	V	Q	L	L	P	D	A	H	L	P	E	L	E	Q	L	T	T	H	S	T	A	T	V	T	X	I	F	D	Q	Q	Q	S	L
Template Known Secondary structure					S	S					S	S										T	T							T	T						S						S										T	T	S							T																	S	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.																						.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	C	Y	D	G	Y	L	T	P	Q	N	P	A	N	Q	H	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	I	G	A	S	Y	H	R	G	S	E	D	T	A	Y	S	E	D	D	Q	Q	Q	N	R	Q	R	L	I	D	C	F	P	Q	A	Q	W	A	K	E	V	D	V
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.
Template Conservation																																																																											.	.
Template Sequence		P	I	E	G	T	G	F	V	V	N	R	R	A	P	Y	S	I	T	A	C	T	A	I	D	Q	K	W	N	H	S	A	P	D	H	T	V	L	R	A	F	V	G	R	P	G	N	D	H	L	V	H	E	S	D	E	V	L	Q	Q	A	V	L	Q	D	L	E	K	I	C	G	R	T	L	.	.	E	P	K	Q	V
Template Known Secondary structure		S	S	S	S	S						T	T	S	S		S												T	T	T		T	T										B	T	T	B		G	G	G	G	S																		S	S			.	.			S
Template Predicted Secondary structure																																																																											.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.			.	.	.	.	400
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.		.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		S	D	K	E	A	R	C	G	V	R	C	A	T	R	D	H	L	P	M	V	G	N	V	P	D	Y	E	A	T	L	V	E	Y	A	S	L	A	E	Q	K	D	E	A	V	S	A	P	V	F	D	D	L	F	M	F	.	A	A	L	G	S	R	G	L	C	S	A	P	L	C	A	E	I	L	A	A	Q	M	S	D
Query Conservation																																																									.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	I	S	R	L	X	D	G	L	P	A	Y	T	V	G	H	A	D	R	I	Q	R	V	R	E	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	Q	Y	P	G	I	Y	L	A	G	L	A	Y	D	G	V	G	L	P	D	C	V	A	S	A	K	T	X	I	E	S	I	E	L
Template Known Secondary structure															T	T													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S	T	T					S	T	T	T	S		S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.																			.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
		637	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		463	.