Job Description P77182 Confidence 99.28% Date Thu Jan 5 12:26:05 GMT 2012 Rank 79 Aligned Residues 321 % Identity 14% Template c3ihgA_ PDB info PDB header:flavoprotein, oxidoreductase Chain: A: PDB Molecule:rdme; PDBTitle: crystal structure of a ternary complex of aklavinone-112 hydroxylase with fad and aklavinone Resolution 2.49 Å

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		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	S	S	K	R	E	A	A	I	I	G	G	G	I	A	S	A	L	L	S	L	A	L	L	R	R	G	W	Q	V	T	L	Y	C	A	D	E	A	P	A	L	G	A	S	G	N	R	Q	G	A	L	Y	P	L	L	S	K	H	D	E	A	L	N	R	F	F	S	N	A	F	T	F	A	R	R	F	Y	D	Q
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	N	D	H	E	V	D	V	L	V	V	G	A	G	L	G	G	L	S	T	A	M	F	L	A	R	Q	G	V	R	V	L	V	V	E	R	R	P	G	L	S	P	Y	P	R	A	A	G	Q	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	T	M	E	L	L	R	I
Template Known Secondary structure						S									S												T	T	T								S	S	S	S							S			B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																						.	.	.	.	.	.	.	.	.
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.													.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	V	K	F	D	H	D	W	C	G	V	T	Q	L	G	W	D	E	K	S	Q	H	K	I	A	Q	M	L	S	M	D	L	P	A	E	L	A	V	A	V	E	A	N	A	V	E	Q	I	T	G	V	A	.	.	.	.	.	.	.	.	.	.	.	.	T	N	C	S	G	I	T	Y	P	Q	G	G	W	L	C
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	E	V	V	R	A	D	D	I	R	G	T	Q	G	D	F	V	I	R	L	A	E	S	V	R	G	E	I	L	R	T	V	S	E	S	F	D	D	M	V	A	A	T	E	P	C	T	P	A	G	W	A	M	L	S
Template Known Secondary structure		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S			S	S		T	T	S								S	S	S	S	S								S								T	T	G	G	G		S				B
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		60	.	.																						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440								.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.
Query Sequence		P	A	E	L	T	R	N	V	L	E	L	A	Q	Q	Q	G	L	Q	I	Y	Y	Q	Y	Q	L	Q	N	L	S	R	K	D	D	.	.	.	.	.	.	.	C	W	L	L	N	F	A	G	D	Q	Q	A	T	H	S	V	V	V	L	A	N	G	H	Q	I	S	R	F	S	Q	T	S	T	L	P	V	Y	S	V	A
Query Conservation																																			.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.																											.
Template Conservation																																																																				.
Template Sequence		Q	D	K	L	E	P	I	L	L	A	Q	A	R	K	H	G	G	A	I	R	F	G	T	R	L	L	S	F	R	Q	H	D	D	D	A	G	A	G	V	T	A	R	L	A	G	P	D	G	E	Y	D	L	R	A	G	Y	L	V	G	A	D	G	N	R	S	L	.	V	R	E	S	L	G	I	G	R	Y	G	H	G
Template Known Secondary structure																T	T					S	S											G	G	G		S									T	T																T	T			.					T	T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.
		481	.	.	.	.	.	.	.											.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Q	V	S	H	I	P	T	.	.	.	.	.	.	.	.	.	.	T	P	E	L	A	E	L	K	Q	V	L	C	Y	D	G	Y	L	T	P	Q	N	P	A	N	Q	H	H	C	I	G	A	S	Y	H	R	G	S	E	D	T	A	Y	S	E	D	D	Q	Q	Q	N	R	Q	R	L	I	D	C	F	P	Q	A	Q
Query Conservation										.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	T	H	M	V	G	V	I	F	D	A	D	L	S	G	I	M	E	P	G	T	T	G	W	Y	Y	L	H	H	P	E	F	K	G	T	F	G	P	T	D	R	P	D	R	H	T	L	F	V	E	Y	D	P	D	E	G	E	R	P	E	D	F	T	P	Q	R	C	V	E	L	I	G	L	A	L	D	A	P	E
Template Known Secondary structure															G	G	G	T	S		T	T										S	S									S	S	T	T										T	T	T	T			G	G	G															T		S	S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570			.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		W	A	K	E	V	D	V	S	D	K	E	A	R	C	G	V	R	C	A	T	.	.	R	D	H	L	P	M	V	G	N	V	P	D	Y	E	A	T	L	V	E	Y	A	S	L	A	E	Q	K	D	E	A	V	S	A	P	V	F	D	D	L	F	M	F	A	A	L	G	S	R	G	L	C	S	A	P	L	C	A	E
Query Conservation																						.	.
Alig confidence																						.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	K	P	E	L	V	D	I	Q	G	W	E	M	A	A	R	I	A	E	R	W	R	E	G	R	V	F	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	A	K	V	T	P	P	T	G	G	M	S	G	N	A	A	V	A	D	G	F
Template Known Secondary structure																				S		S			T	T					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T					S	T	T	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.																													.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		629	630	.				.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		I	L	A	.	.	.	A	Q	M	S	D	E	P	I	P	M	D	A	S	T	L	A	A	L	N	P	N	R
Query Conservation					.	.	.
Alig confidence					.	.	.										.	.
Template Conservation																	.	.
Template Sequence		D	L	A	W	K	L	A	A	V	L	Q	G	Q	A	G	.	.	A	G	L	L	D	T	Y	E	D	E	R
Template Known Secondary structure												T	T	S	S		.	.	T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions