Job Description P77182 Confidence 98.29% Date Thu Jan 5 12:26:05 GMT 2012 Rank 265 Aligned Residues 124 % Identity 20% Template c3gjyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:spermidine synthase; PDBTitle: crystal structure of a probable spermidine synthase from2 corynebacterium glutamicum atcc 13032 Resolution 1.47 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	P	L	F	V	V	A	E	S	G	F	G	T	G	L	N	F	L	T	L	W	Q	A	F	D	Q	F	R	E	A	H	P	Q	A	Q	L	Q	R	L	H	F	I	S	F	E	K	F	P	L	T	R	A	D	L	A	L	A	H	Q	H	W	P	E	L	A	P	W	A	E	Q	L	Q	A	Q	W	P	M	P	L
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	A	S	K	L	R	I	T	H	L	G	G	G	A	C	T	X	A	R	Y	F	A	D	V	Y	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	S	R	N	T	V	V	E	.	.	.	L	D	A	E	L	A	R	L	S	R	E	W	F	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			G	G	G							S		G	G	G										S	T	T	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	S												S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.								.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110													.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		P	G	C	H	R	L	L	L	D	E	G	R	V	T	L	D	L	W	F	G	D	I	N	E	L	T	S	Q	L	D	D	S	L	N	Q	K	V	D	A	W	F	L	D	G	F	A	P	A	.	K	N	P	D	M	W	T	Q	N	L	F	N	A	M	A	R	L	A	R	P	G	G	T	L	A	T	F	T	S	A	G
Query Conservation																																																		.
Alig confidence		.	.	.	.	.	.	.								.	.														.	.	.																	.
Template Conservation		.	.	.	.	.	.	.								.	.														.	.	.
Template Sequence		.	.	.	.	.	.	.	P	R	A	P	R	V	K	.	.	I	R	V	D	D	A	R	X	V	A	E	S	F	.	.	.	T	P	A	S	R	D	V	I	I	R	D	V	F	A	G	A	I	T	P	Q	N	F	T	T	V	E	F	F	E	H	C	H	R	G	L	A	P	G	G	L	Y	V	A	N	C	G	D	H
Template Known Secondary structure		.	.	.	.	.	.	.			T	T	T			.	.				S								T		.	.	.		T	T										S	T	T	S				G	G	G	S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.								.	.														.	.	.
Template SS confidence
									133	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		215	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	R	R	G	L	Q	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	L	R	G	A	K	S
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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