 |
Job Description | P77182 | Confidence | 99.20% | Date | Thu Jan 5 12:26:05 GMT 2012 |
Rank | 91 | Aligned Residues | 156 |
% Identity | 18% | Template | c3g05B_ |
PDB info |
PDB header:rna binding protein | Chain: B: PDB Molecule:trna uridine 5-carboxymethylaminomethyl modification enzyme |
PDBTitle: crystal structure of n-terminal domain (2-550) of e.coli mnmg
|
Resolution | 3.49 Å |
|
 |
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | R | T | G | S | S | K | R | E | A | A | I | I | G | G | G | I | A | S | A | L | L | S | L | A | L | L | R | R | G | W | Q | V | T | L | Y | C | A | D | E | A | P | A | L | G | A | S | G | N | R | Q | G | A | L | Y | P | L | L | S | K | H | D | E | A | L | N | R | F | F | S | N | A | F | T | F | A | R | R | F | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|
|   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |
|
| . | . | . | . | . |   |   |   |
|   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
G | S | F | Y | P | D | P | F | D | V | I | I | I | G | G | G | H | A | G | T | E | A | A | M | A | A | A | R | M | G | Q | Q | T | L | L | L | T | H | N | I | D | T | L | G | Q | M | S | C | N | P | A | I | G | G | . |
. |
. |
. |
. |
I | G | K | G | H | L | V | K | E | V | D | A | L | G | G | L | M | A | K | A | I |
Template Known Secondary structure |   |
| S |
|
| S | S |  |  |  |  |  |  |  | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
| S |
| T | T | T | T | T |
|
|
| S | S | S |  |  |  | S | . | . | . | . | . | T | T |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|