Return to main results Retrieve Phyre Job Id

Job DescriptionP77182
Confidence99.12%DateThu Jan 5 12:26:05 GMT 2012
Rank101Aligned Residues287
% Identity16%Templatec3c4aA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:probable tryptophan hydroxylase viod; PDBTitle: crystal structure of viod hydroxylase in complex with fad2 from chromobacterium violaceum. northeast structural3 genomics consortium target cvr158
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   265....270.........280...... ...290.........300.........310.........320.........330.........340..
Predicted Secondary structure 





..
























Query SS confidence 





















. .























































Query Sequence  REAAIIGGGIASALLSLALLRR. . GWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPV
Query Conservation    











 
  

 
..
  




       



  

 
 
 
        

   
      
   
  
Alig confidence 





















..












..























............




Template Conservation   

 




 


  
  


   
  
 
 

    ..   
  
          
   
  ............     
Template Sequence  XKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ. . EVLGWGVVLPGRPGQHPANPLSYL. . . . . . . . . . . . DAPER
Template Known Secondary structure 


S
TTS
SS
TT..



SS
TTT
TT
GGGGS............S
GGG
Template Predicted Secondary structure 













..









............
Template SS confidence 















































































   1........10.........20.........30....... ..40.........50.........60. .....
 
   343......350.........360.........370.........380.........390.........400.........410.........420..
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  KFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQ
Query Conservation         
 
 

                                         

  
  
 
 
  
  

       
Alig confidence 














...................................





























Template Conservation                 ...................................             
 
  
   
       
Template Sequence  LNPQFLEDFKLVHHN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EPSLXSTGVLLCGVERRGLVHALRDKCRSQ
Template Known Secondary structure  G



SS...................................S



S
T
Template Predicted Secondary structure 










...................................





Template SS confidence 















































































   67..70.........80. ........90.........100.........110.
 
   423......430.........440.........450.........460..... ....470.........480.........490.........500
Predicted Secondary structure 



















..













Query SS confidence 










































. .


































Query Sequence  GLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQI. . SRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLC
Query Conservation 
  
     
  
                  

 

 


  
..  
     


 





  
            
 
Alig confidence 
















...........














..


































Template Conservation                   ...........   
 






  
 

  
                               
Template Sequence  GIAIRFESPLLEHGELP. . . . . . . . . . . LADYDLVVLANGVNHKTAHFTEALVPQVDYGRNKYIWYGTSQLFDQXNLVFR
Template Known Secondary structure  T
TT



SGGG

...........GGG
S

GGGGGT

SSGGG



SS

SS
Template Predicted Secondary structure 











...........
























Template SS confidence 















































































   112.......120........ .130.........140.........150.........160.........170.........180
 
   501.. ......510.........520.........530.........540.........550.........560.........570.....
Predicted Secondary structure 


.....
































Query SS confidence 


. . . . .







































































Query Sequence  YDG. . . . . YLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLP
Query Conservation    
.....
  
     
  




                  
  
    
 
              

 
  


 

Alig confidence 


.....







































































Template Conservation              
                                                                   
Template Sequence  THGKDIFIAHAYKYSDTXSTFIVECSEETYARARLGEXSEEASAEYVAKVFQAELGGHGLVSQPGLGWRNFXTLSHDRCH
Template Known Secondary structure  TT
SSS

TTSSSS
TTT


B

TTT
S


S
S
Template Predicted Secondary structure 

















































Template SS confidence 















































































   181........190.........200.........210.........220.........230.........240.........250.........260
 
   576...580.........590.........600.........610.........620.........630.........
Predicted Secondary structure  .....






































Query SS confidence  . . . . .































































Query Sequence  . . . . . MVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPI
Query Conservation  .....


 
         
             
   

 
  
 

 

  


 

 

  
 
 
 
Alig confidence  .....




............................






























Template Conservation    

 




............................

   
  
 
   

 

  

  
     
Template Sequence  DGKLVLLGDA. . . . . . . . . . . . . . . . . . . . . . . . . . . . LQSGHFSIGHGTTXAVVVAQLLVKALCTEDG
Template Known Secondary structure  TT
GGG............................T



GGG

SSS
Template Predicted Secondary structure 





............................















Template SS confidence 




































































   261........270 .........280.........290.........300.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions