Job Description P77182 Confidence 100.00% Date Thu Jan 5 12:26:05 GMT 2012 Rank 17 Aligned Residues 350 % Identity 13% Template c2r4jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:aerobic glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of escherichia coli semet substituted2 glycerol-3-phosphate dehydrogenase in complex with dhap Resolution 1.96 Å

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		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	A	I	I	G	G	G	I	A	S	A	L	L	S	L	A	L	L	R	R	G	W	Q	V	T	L	Y	C	A	D	E	A	P	A	L	G	A	S	G	N	R	Q	G	A	L	Y	P	L	L	S	K	H	D	E	A	L	N	R	F	F	S	N	A	F	T	F	A	R	R	F	Y	D	Q	L	P	V	K	F	D
Query Conservation
Alig confidence																																		.
Template Conservation																																		.
Template Sequence		D	L	I	V	I	G	G	G	I	N	G	A	G	I	A	A	D	A	A	G	R	G	L	S	V	L	X	L	E	A	Q	D	.	L	A	C	A	T	S	S	A	S	S	K	L	I	H	G	G	L	R	Y	L	E	H	Y	E	F	R	L	V	S	E	A	L	A	E	R	E	V	L	L	K	X	A	P	H	I	A	F
Template Known Secondary structure									S												T	T	T								S	S	S	.	T	T		S	G	G	G	S	S								G	G	G	G	G	G	T																				T	T	T
Template Predicted Secondary structure																																		.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		346	.	.	.	350	.	.	.	.			.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		H	D	W	C	G	V	T	Q	L	.	.	G	W	D	E	K	S	Q	H	K	I	A	Q	M	L	S	M	D	L	P	A	E	L	A	V	A	V	E	A	N	A	V	E	Q	I	T	G	V	A	T	N	C	S	G	I	T	Y	P	Q	G	G	W	L	C	P	A	E	L	T	R	N	V	L	E	L	A	Q	Q	Q	G
Query Conservation											.	.
Alig confidence											.	.
Template Conservation
Template Sequence		P	X	R	F	R	L	P	H	R	P	H	L	R	P	A	W	M	I	R	I	G	L	F	M	Y	D	H	L	G	K	R	T	S	L	P	G	S	T	G	L	R	F	G	A	N	S	V	L	K	P	E	I	K	R	G	F	E	Y	S	D	C	W	V	D	D	A	R	L	V	L	A	N	A	Q	X	V	V	R	K	G
Template Known Secondary structure											T	T	T	S															S	S			S	S	S										T	T	S	S	B		T	T																												T	T
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		424	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.						.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.						.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.
Predicted Secondary structure																						.	.	.	.	.																														.	.	.	.	.
Query SS confidence																						.	.	.	.	.																														.	.	.	.	.
Query Sequence		L	Q	I	Y	Y	Q	Y	Q	L	Q	N	L	S	R	K	D	D	C	W	L	.	.	.	.	.	L	N	F	A	G	D	Q	Q	A	T	H	S	V	V	V	L	A	N	G	H	Q	I	S	R	F	S	Q	T	S	.	.	.	.	.	T	L	P	V	Y	S	V	A	G	Q	V	S	H	I	P	T	T	P	E	L	A
Query Conservation																						.	.	.	.	.																														.	.	.	.	.
Alig confidence																						.	.	.	.	.																														.	.	.	.	.
Template Conservation
Template Sequence		G	E	V	L	T	R	T	R	A	T	S	A	R	R	E	N	G	L	W	I	V	E	A	E	D	I	D	T	G	K	K	Y	S	W	Q	A	R	G	L	V	N	A	T	G	P	W	V	K	Q	F	F	D	D	G	X	H	L	P	S	P	Y	G	I	R	L	I	K	G	S	H	I	V	V	P	R	V	H	T	Q	K
Template Known Secondary structure							S										T	T									T	T	T																G	G	G								T	T					S	S															S		S		S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		494	.	.	.	.	.	500	.	.	.		.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520				.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.		.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.
Predicted Secondary structure												.																		.	.	.																													.
Query SS confidence												.																		.	.	.																													.
Query Sequence		E	L	K	Q	V	L	C	Y	D	G	.	Y	L	T	P	Q	N	P	A	N	Q	H	H	C	I	G	A	S	.	.	.	Y	H	R	G	S	E	D	T	A	Y	S	E	D	D	Q	Q	Q	N	R	Q	R	L	I	D	C	F	P	Q	.	A	Q	W	A	K	E	V	D	V	S	D	K	E	A	R	C	G	V	R	C
Query Conservation												.																		.	.	.																													.
Alig confidence												.																		.	.	.																													.			.	.	.	.	.
Template Conservation																																																																.	.	.	.	.
Template Sequence		Q	A	Y	I	L	Q	N	E	D	K	R	I	V	F	V	I	P	W	X	D	E	F	S	I	I	G	T	T	D	V	E	Y	K	G	D	P	K	A	V	K	I	E	E	S	E	I	N	Y	L	L	N	V	Y	N	T	H	F	K	K	Q	L	S	.	.	.	.	.	R	D	D	I	V	W	T	Y	S	G	V	R	P
Template Known Secondary structure									T	T	S									T	T	T													S		G	G	G																	T	T	B	S	S				.	.	.	.	.	G	G	G
Template Predicted Secondary structure																																																																.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.						.	.	.	.	310	.	.	.	.	.	.	.	.
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	R	D	H	L	P	M	V	G	N	V	P	D	Y	E	A	T	L	V	E	Y	A	S	L	A	E	Q	K	D	E	A	V	S	A	P	V	F	D	D	L	F	M	F	A	A	L	G	S	R	G	L	C	S	A	P	L	C	A	E	I	L	A	A	Q	M	S	D
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		L	C	D	D	E	S	D	S	P	Q	A	I	.	.	.	.	.	.	.	.	.	.	.	.	T	R	D	Y	T	L	D	I	H	D	E	N	G	K	A	P	L	L	S	V	F	G	G	K	.	.	.	L	T	T	Y	R	K	L	A	E	H	A	L	E	K	L	T	P
Template Known Secondary structure								S	S	G	G	G	S	.	.	.	.	.	.	.	.	.	.	.	.											S	S	S		S										.	.	.	S	T	T													G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		319	320	.	.	.	.	.	.	.	.	.	330													.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.				.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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