Job Description P77182 Confidence 99.09% Date Thu Jan 5 12:26:05 GMT 2012 Rank 109 Aligned Residues 323 % Identity 15% Template c2r0gB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:rebc; PDBTitle: chromopyrrolic acid-soaked rebc with bound 7-carboxy-k252c Resolution 2.37 Å

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		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	S	K	R	E	A	A	I	I	G	G	G	I	A	S	A	L	L	S	L	A	L	L	R	R	G	W	Q	V	T	L	Y	C	A	D	E	A	P	A	L	G	A	S	G	N	R	Q	G	A	L	Y	P	L	L	S	K	H	D	E	A	L	N	R	F	F	S	N	A	F	T	F	A	R	R	F	Y	D	Q	L
Query Conservation
Alig confidence																																									.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	I	E	T	D	V	L	I	L	G	G	G	P	V	G	M	A	L	A	L	D	L	A	H	R	Q	V	G	H	L	V	V	E	Q	T	D	G	T	.	.	.	I	T	H	P	R	V	G	T	I	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	M	E	L	F	R	R	W
Template Known Secondary structure														S												T	T	T								S	S		S		.	.	.		S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T
Template Predicted Secondary structure																																									.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.																			.	.	.	.	.	.	.	60	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.							.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		P	V	K	F	D	H	D	W	C	G	V	T	Q	L	G	W	D	E	K	S	Q	H	K	I	A	Q	M	L	S	M	D	L	P	A	E	L	A	V	.	.	.	.	.	.	A	V	E	A	N	A	V	E	Q	I	T	G	V	A	T	N	C	S	G	I	T	Y	P	Q	G	G	W	L	C	P	A	E	L	T	R	N
Query Conservation																																								.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	Q	I	R	T	A	G	W	P	G	D	H	P	L	D	A	A	W	V	T	R	V	G	G	H	E	V	Y	R	I	P	L	G	T	A	D	T	R	A	T	P	E	H	T	P	E	P	D	A	I	C	P	Q	H	W	L
Template Known Secondary structure		T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	S	S			T	T	S								S	S	B	T	S											T	T	T	S				S	S		S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.																						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.						.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		V	L	E	L	A	Q	Q	Q	G	L	Q	I	Y	Y	Q	Y	Q	L	Q	N	L	S	R	K	D	D	C	W	L	L	N	F	.	.	.	.	.	A	G	D	Q	Q	A	T	H	S	V	V	V	L	A	N	G	H	Q	I	S	R	F	S	Q	T	S	T	L	P	V	Y	S	V	A	G	Q	V	S	H	I	P	T	T
Query Conservation																																		.	.	.	.	.
Alig confidence																																		.	.	.	.	.
Template Conservation
Template Sequence		A	P	L	L	A	E	A	V	G	E	R	L	R	T	R	S	R	L	D	S	F	E	Q	R	D	D	H	V	R	A	T	I	T	D	L	R	T	G	A	T	R	A	V	H	A	R	Y	L	V	A	C	D	G	A	S	S	P	T	R	K	A	L	G	I	D	A	P	P	R	H	R	T	Q	V	F	R	N	I	L	F
Template Known Secondary structure										G	G	G				S										S	S									T	T	T																	T	T							T	T					B	S	S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		P	E	L	A	E	L	K	Q	V	L	C	Y	D	G	Y	L	T	P	Q	N	P	A	N	Q	H	H	C	I	G	A	S	Y	H	R	G	S	E	D	T	A	Y	S	E	D	D	Q	Q	Q	N	R	Q	R	L	I	D	C	F	P	Q	A	Q	W	A	K	E	V	D	V	S	D	K	E	A	R	C	G	V	.	R	C
Query Conservation																																																																															.
Alig confidence																																																																															.
Template Conservation
Template Sequence		R	A	P	E	L	R	S	L	L	G	E	R	A	A	L	F	F	F	L	M	L	S	S	S	L	R	F	P	L	R	A	L	D	G	R	G	L	Y	R	L	T	V	G	V	D	T	M	D	S	F	E	L	V	R	R	A	V	A	F	D	T	E	I	E	V	L	S	D	S	E	W	H	L	T	H	R	V	A	D	S
Template Known Secondary structure				T	T						G	G	G			S						S		S	S	S		S					S	S	S	S	S																					B		S																	B	B		S
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
		569	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.					.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.
Query SS confidence																																																										.	.	.	.
Query Sequence		A	T	R	D	H	L	P	M	V	G	N	V	P	D	Y	E	A	T	L	V	E	Y	A	S	L	A	E	Q	K	D	E	A	V	S	A	P	V	F	D	D	L	F	M	F	A	A	L	G	S	R	G	L	C	S	A	P	.	.	.	.	L	C	A	E	I	L	A	A	Q	M	S	D	E	P	I	P	M	D	A	S
Query Conservation																																																										.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.														.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		F	S	A	G	R	V	F	L	T	G	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	T	L	S	P	S	G	G	F	G	M	N	T	G	I	G	S	A	A	D	L	G	W	K	L	A	A	T	L	R	G	W	.	.	.	A	G	P	G
Template Known Secondary structure		S			T	T					G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	B				S	T	T	S																							T		.	.	.	S		T	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.																													.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330				.	.	.	.
		645	.	.	.	.	650	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	A	A	L	N	P	N	R	L	W	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A	T	Y	E	E	E	R	R	P	V
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions