Return to main results Retrieve Phyre Job Id

Job DescriptionP77182
Confidence97.46%DateThu Jan 5 12:26:05 GMT 2012
Rank338Aligned Residues178
% Identity13%Templatec2b78A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein smu.776; PDBTitle: a putative sam-dependent methyltransferase from2 streptococcus mutans
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40.........50.........60.........70.........80.......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  PANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAH
Query Conservation   
       
   
    
 
        
    
     
             
 
 


 
 
 
             
Alig confidence 


















..













.......




























.........
Template Conservation         
 
  
 
    ..  


  



  
.......         
  




 


  

 

 .........
Template Sequence  PEQFLILENGISYNVFLND. . GLMTGIFLDQRQVR. . . . . . . NELINGSAAGKTVLNLFSYTAAFSVAAAM. . . . . . . . .
Template Known Secondary structure 
SSTT
SSS..SS

SS
GGG.......TTTBT
T
TTT.........
Template Predicted Secondary structure 




..






.......








.........
Template SS confidence 















































































   171........180......... 190.........200... ......210.........220.........230..
 
   88.90.........100.........110.........120.........130.........140.........150.........160.......
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  PQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDS
Query Conservation         
   
 
  
     
                
         
            
 
  

           
Alig confidence  ...



.






















........................






..















Template Conservation  ... 

 . 
  

 
  

  
  
   
 ........................
      ..    
    
      
Template Sequence  . . . GGAM. ATTSVDLAKRSRALSLAHFEANH. . . . . . . . . . . . . . . . . . . . . . . . LDMANHQ. . LVVMDVFDYFKYARRH
Template Known Secondary structure  ...TTBS.S
TTTT........................


TT..S
T
Template Predicted Secondary structure  ...



.



........................




..


Template SS confidence 















































































   233... ...240.........250......... 260...... ...270.........280..
 
   168.170.........180.........190 .........200.........210...... ...220.........230....
Predicted Secondary structure 













.







.........







Query SS confidence 






















.

























. . . . . . . . .

















Query Sequence  LNQKVDAWFLDGFAPAKNPDMWT. QNLFNAMARLARPGGTLATFTSAGFV. . . . . . . . . RRGLQDAGFTMQKRKGFG
Query Conservation       
   

 
 
  

  
 .                  
   
  
.........
  
   

      
  
Alig confidence  .





















.

























.........

















Template Conservation  .   

 





 
           
   
  

 


 
   
 
       
   
  
               
Template Sequence  . HLTYDIIIIDPPSFEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHTYLDLQQLP
Template Known Secondary structure  .T










T

TTS
TT





Template Predicted Secondary structure  .


























Template SS confidence 












































































   283......290.........300.........310.........320.........330.........340.........350........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions