Return to main results Retrieve Phyre Job Id

Job DescriptionP77182
Confidence97.12%DateThu Jan 5 12:26:05 GMT 2012
Rank374Aligned Residues173
% Identity19%Templatec2as0A_
PDB info PDB header:transferaseChain: A: PDB Molecule:hypothetical protein ph1915; PDBTitle: crystal structure of ph1915 (apc 5817): a hypothetical rna2 methyltransferase
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  QPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREA
Query Conservation    
       
   
    
 
        
    
     
             
 
 


 
 
 
            
Alig confidence 
















...






.......






































.......
Template Conservation        
 
 
      ...   
 

....... 




  
         
 




  
 
  
   
  .......
Template Sequence  EKYRTIIQEGRAKFIVD. . . XRGQKTG. . . . . . . FFLDQRENRLALEKWVQPGDRVLDVFTYTGGFAIHAAIA. . . . . . .
Template Known Secondary structure 


TT...SSSSSS
.......

STTGGG

TT
TT
TTTT.......
Template Predicted Secondary structure 




...






.......
















.......
Template SS confidence 















































































   176...180.........190.. ....... 200.........210.........220.........230........
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  HPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDD
Query Conservation          
   
 
  
     
                
         
            
 
  

          
Alig confidence  ......








...













........................























Template Conservation  ......

  
  

...    

  
  
  ........................ 

          
    
     
Template Sequence  . . . . . . GADEVIGID. . . KSPRAIETAKENAK. . . . . . . . . . . . . . . . . . . . . . . . LNGVEDRXKFIVGSAFEEXEKLQK
Template Known Secondary structure  ......T
S...S
........................TT
GGGS
Template Predicted Secondary structure  ......


...

........................








Template SS confidence 















































































   239240....... ..250.........260. ........270.........280.....
 
   167..170.........180.........190. ........200.........210... ......220.........230
Predicted Secondary structure 














......







.........



Query SS confidence 
























. . . . . .





















. . . . . . . . .
















Query Sequence  SLNQKVDAWFLDGFAPAKNPDMWTQ. . . . . . NLFNAMARLARPGGTLATFTSA. . . . . . . . . GFVRRGLQDAGFTMQKR
Query Conservation        
   

 
 
  

  
  ......                 
   
.........  

  
   

     
Alig confidence 
.






















......





















.........
















Template Conservation   .   

 

 


                  

  
   
 


 
   


       
   
  
    

    
Template Sequence  K. GEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQHVDLQXFKDXIIAAGAKAGKFLKXL
Template Known Secondary structure  T.T





S
SSGGGTT

TTS
TTS
Template Predicted Secondary structure 
.

























Template SS confidence 














































































   286 ...290.........300.........310.........320.........330.........340.........350.........360...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions