Job Description P77182 Confidence 99.45% Date Thu Jan 5 12:26:05 GMT 2012 Rank 52 Aligned Residues 197 % Identity 14% Template c2aczA_ PDB info PDB header:oxidoreductase/electron transport Chain: A: PDB Molecule:succinate dehydrogenase flavoprotein subunit; PDBTitle: complex ii (succinate dehydrogenase) from e. coli with atpenin a52 inhibitor co-crystallized at the ubiquinone binding site Resolution 3.10 Å

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		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	T	G	S	S	K	R	E	A	A	I	I	G	G	G	I	A	S	A	L	L	S	L	A	L	L	R	R	G	W	Q	V	T	L	Y	C	A	D	E	A	P	A	L	G	A	S	G	N	R	Q	G	A	L	Y	P	L	L	S	K	H	D	E	A	L	N	R	F	F	S	N	A	F	T	F	A	R	R	F	Y	D
Query Conservation
Alig confidence																																									.																																					.	.	.	.
Template Conservation																																									.																																					.	.	.	.
Template Sequence		K	L	P	V	R	E	F	D	A	V	V	I	G	A	G	G	A	G	M	R	A	A	L	Q	I	S	Q	S	G	Q	T	C	A	L	L	S	K	V	F	.	P	T	R	S	H	T	V	S	A	Q	G	G	I	T	V	A	L	G	N	T	H	E	D	N	W	E	W	H	M	Y	D	T	V	K	G	S	.	.	.	.
Template Known Secondary structure			S		B			B	S							S													T	T								S	S		.	G	G	G	S	G	G	G	G			S								S	S	S																.	.	.	.
Template Predicted Secondary structure																																									.																																					.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.			.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		Q	L	P	V	K	F	D	H	D	W	C	G	V	T	Q	L	G	W	D	E	K	S	Q	H	K	I	A	Q	M	L	S	M	D	L	P	A	E	L	A	V	A	V	E	A	N	A	V	E	Q	I	T	G	V	.	.	A	T	N	C	S	G	I	T	Y	P	Q	G	G	W	L	C	P	A	E	L	T	R	N	V	L
Query Conservation																																																							.	.
Alig confidence		.	.	.	.	.	.																																																.	.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	D	Y	I	G	D	Q	D	A	I	E	Y	M	C	K	T	G	P	E	A	I	L	E	L	E	H	M	G	L	P	F	S	R	L	D	D	G	R	I	Y	Q	R	P	F	G	G	Q	S	K	N	F	G	G	E	Q	A	A	R	T	A	A	A	A	D	R	T	G	H	A	L	L	H	T	L	Y
Template Known Secondary structure		.	.	.	.	.	.	T	S		S																					T	T	T					B		S			S	S					S	S	B						T	T	S	S	S						S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.								.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.
Query Sequence		E	L	A	Q	Q	Q	G	L	Q	I	Y	Y	Q	Y	Q	L	Q	N	L	S	R	K	D	D	C	W	L	L	.	.	.	.	.	.	.	N	F	A	G	D	Q	Q	A	T	H	S	V	V	V	L	A	N	G	H	Q	I	S
Query Conservation																														.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	Q	N	L	K	N	H	T	T	I	F	S	E	W	Y	A	L	D	L	V	K	N	Q	D	G	A	V	V	G	C	T	A	L	C	I	E	T	G	E	V	V	Y	F	K	A	R	A	T	V	L	A	T	G	G	A	G	R
Template Known Secondary structure							T	T						S										T	T	S										T	T	T								B	S										T	T
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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