Job Description P77182 Confidence 98.62% Date Thu Jan 5 12:26:05 GMT 2012 Rank 201 Aligned Residues 273 % Identity 13% Template c1y56A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:hypothetical protein ph1363; PDBTitle: crystal structure of l-proline dehydrogenase from p.horikoshii Resolution 2.86 Å

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		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		A	R	L	A	R	P	G	G	T	L	A	T	F	T	S	A	G	F	V	R	R	G	L	Q	D	A	G	F	T	M	Q	K	R	K	G	F	G	R	K	R	E	M	L	C	G	V	M	E	Q	T	.	.	L	P	L	P	C	S	A	P	W	F	N	R	T	G	S	S	K	R	E	A	A	I	I	G	G	G	I	A
Query Conservation																																																				.	.
Alig confidence																		.																																		.	.
Template Conservation																		.
Template Sequence		V	A	L	L	A	N	E	I	Y	W	L	T	T	S	N	E	.	G	R	K	R	G	A	F	T	F	G	P	V	P	M	T	V	N	G	V	K	G	L	E	A	R	R	I	K	V	K	D	G	M	K	I	E	R	Q	G	Y	Y	D	F	H	E	E	E	I	E	R	V	V	V	D	V	A	I	I	G	G	G	P	A
Template Known Secondary structure							T	T								T	T	.	S					S	S	S	S	S					B	S	S	S		T	T			G	G	G		B			T	T				B				T	T													S							S
Template Predicted Secondary structure																		.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	L	L	S	L	A	L	L	R	R	G	W	Q	V	T	L	Y	C	A	D	E	A	P	A	L	G	A	S	G	N	R	Q	G	A	L	Y	P	L	L	S	K	H	D	E	A	L	N	R	F	F	S	N	A	F	T	F	A	R	R	F	Y	D	Q	L	P	V	K	F	D	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence												.																.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	G	A	A	L	E	L	Q	Q	.	Y	L	T	V	A	L	I	E	E	R	G	W	L	G	G	.	.	.	.	.	.	.	.	.	.	.	.	D	M	W	L	K	G	I	K	Q	E	G	F	N	K	D	S	R	K	V	V	E	E	L	V	G	K	L	N	E	N	T	K	I	Y	L	E	T	S	A	L	G	V
Template Known Secondary structure										T	T	.	T								T	T	S	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	G	T		S			T	T	T	T													T			T	T					T	T
Template Predicted Secondary structure												.																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.													.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
																											346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	D	W	C	G	V	T	Q	L	G	W	D	E	K	S	Q	H	K	I	A	Q	M	L	S	M	D	L	P	A	E	L	A	V	A	V	E	A	N	A	V	E	Q	I	T	G	V	A	T	N	C	S	G	I	T	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	K	G	E	Y	F	L	V	P	V	V	R	G	D	K	L	I	E	I	L	A	K	R	V	V	L	A	T	G	A	I	D	S	T	M	L	.	.	.	.	.	.	.	.	.	.	F	E	N	N	D	M	P	G	V	F	R	R	D	F	A	L	E	V	M	N	V	W	E	V	A	P	G	R	K	V	A	V	T
Template Known Secondary structure					S	S	S								T	T								S															.	.	.	.	.	.	.	.	.	.		T	T	T	T	S	T	T													T	S		B		S		S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.											.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.		.	.	.	470	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		P	Q	G	G	W	L	C	P	A	E	L	T	R	N	V	L	E	L	A	Q	Q	Q	G	L	Q	I	Y	Y	Q	Y	Q	L	Q	N	L	S	R	K	D	D	C	W	L	L	N	F	A	G	D	Q	Q	A	T	H	S	V	V	V	L	A	N	G	H	Q	I	S	.	R	F	S	Q	T	S	T	L	P	V	Y	S	V
Query Conservation																																																																				.
Alig confidence					.	.	.	.	.	.	.	.																																																								.
Template Conservation					.	.	.	.	.	.	.	.
Template Sequence		G	S	K	.	.	.	.	.	.	.	.	A	D	E	V	I	Q	E	L	E	R	W	G	I	D	Y	V	H	I	P	N	V	K	R	V	E	G	N	E	K	V	E	R	V	I	D	M	N	N	H	E	Y	K	V	D	A	L	I	F	A	D	G	R	R	P	D	I	N	P	I	T	Q	A	G	G	K	L	R	F	R
Template Known Secondary structure		S	T	T	.	.	.	.	.	.	.	.												T							S	S							S	S	S							T	T							S																		T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.
Template SS confidence
		255	.	.									.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Q	V	S	H	I	P	T	T	P	E	L	A	E	L	K	Q	V	L	C	Y	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	G	Y	Y	S	P	V	L	D	E	Y	H	R	I	K	D	G	I	Y	V	A	G	S
Template Known Secondary structure		T	T								T	T	S				T	T					S	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions