Job Description P77182 Confidence 100.00% Date Thu Jan 5 12:26:05 GMT 2012 Rank 15 Aligned Residues 349 % Identity 12% Template c1c0iA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-amino acid oxidase; PDBTitle: crystal structure of d-amino acid oxidase in complex with2 two anthranylate molecules Resolution 1.90 Å

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		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		S	S	K	R	E	A	A	I	I	G	G	G	I	A	S	A	L	L	S	L	A	L	L	R	R	G	W	Q	V	T	L	Y	C	A	D	E	A	P	A	L	G	A	S	G	N	R	Q	G	A	L	Y	P	L	L	S	K	H	D	E	A	L	N	.	.	.	R	F	F	S	N	A	F	T	F	A	R	R	F	Y	D
Query Conservation																																																																.	.	.
Alig confidence																																						.																										.	.	.
Template Conservation																																						.
Template Sequence		H	S	Q	K	R	V	V	V	L	G	S	G	V	I	G	L	S	S	A	L	I	L	A	R	K	G	Y	S	V	H	I	L	A	R	D	L	.	P	E	D	V	S	S	Q	T	F	A	S	P	W	A	G	A	N	W	T	P	F	M	T	L	T	D	G	P	R	Q	A	K	W	E	E	S	T	F	K	K	W	V	E
Template Known Secondary structure				S									S													T	T								S	S		.	T	T		T	T		T	T	S	S	G	G	G				B					S		T	T	T
Template Predicted Secondary structure																																						.
Template SS confidence
		1002	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.		.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	P	V	K	F	D	H	D	W	C	G	V	T	Q	L	G	W	D	E	K	S	Q	H	K	I	A	Q	M	L	S	M	D	L	P	A	E	L	A	V	A	V	E	A	N	A	V	E	Q	I	T	G	V	A	T	N	C	S	G	I	T	Y	P	Q	G	G	W	L	C	P	A	E	L	T	R	N	V	L	E	L
Query Conservation
Alig confidence																														.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																														.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		L	V	P	T	G	H	A	M	W	L	K	G	T	R	R	F	A	Q	N	E	D	G	L	L	G	H	W	Y	.	.	.	.	K	D	I	T	P	N	Y	R	P	L	P	S	S	E	C	P	P	.	.	.	.	.	.	.	G	A	I	G	V	T	Y	D	T	L	S	V	H	A	P	K	Y	C	Q	Y	L	A	R	E
Template Known Secondary structure			T	T	T	T	S	S											S	S	G	G	G	G	G	G	G	T	T	.	.	.	.	T	T	T	S	T	T						G	G	G	S		T	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																														.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		1081	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.					.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.								.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	Q	Q	G	L	Q	I	Y	Y	Q	Y	Q	L	Q	N	L	S	R	K	D	D	C	W	L	L	N	F	A	G	D	Q	Q	A	T	H	S	V	V	V	L	A	N	G	H	Q	I	S	R	F	S	Q	T	S	T	L	P	V	Y	S	V	A	G	Q	V	S	H	I	P	T	T	P	E	L	A	E	L	K	Q	V
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	K	L	G	A	T	F	E	R	R	T	V	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	Q	A	F	D	G	A	D	L	V	V	N	A	T	G	L	G	A	K	S	I	A	G	I	D	D	Q	A	A	E	P	I	R	G	Q	T	V	L	V	K	S	P	C	K	R	C	T	M	D	S	S
Template Known Secondary structure					T	T									S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T		S	S		S							G	G	G	G	G	T	S	B	T	T			T	T																							S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.														.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.
		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.		.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		L	C	Y	D	G	Y	L	T	P	Q	N	P	A	N	Q	H	H	C	I	G	A	S	Y	H	R	G	S	E	D	T	A	Y	S	E	D	D	Q	Q	Q	N	R	Q	R	L	I	D	C	F	P	Q	A	Q	W	A	K	.	E	V	D	V	S	D	K	E	A	R	C	G	V	R	C	A	T	R	D	H	L	P	M	V
Query Conservation																																																									.
Alig confidence													.																																												.
Template Conservation													.
Template Sequence		D	P	A	S	P	A	Y	I	I	P	R	.	P	G	G	E	V	I	C	G	G	T	Y	G	V	G	D	W	D	L	S	V	N	P	E	T	V	Q	R	I	L	K	H	C	L	R	L	D	P	T	I	S	S	D	G	T	I	E	G	I	E	V	L	R	H	N	V	G	L	R	P	A	R	R	G	G	P	R	V	E
Template Known Secondary structure			T	T									.	T	T	T											T					S																		G	G	G	S	S	S	S	S	G	G	G															T	T	S
Template Predicted Secondary structure													.
Template SS confidence
		1217	.	.	1220	.	.	.	.	.	.	.		.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.
		578	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	P	D	Y	E	A	T	L	V	E	Y	A	S	L	A	E	Q	K	D	E	A	V	S	A	P	V	F	D	D	L	F	M	F	A	A	L	G	S	R	G	L	C	S	A	P	L	C	A	E	I	L	A	A	Q	M	S	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	E	R	I	V	L	P	L	D	R	T	K	S	P	L	S	L	G	R	G	S	A	R	A	A	K	E	K	E	V	T	L	V	H	A	Y	G	F	S	S	A	G	Y	Q	Q	S	W	G	A	A	E	D	V	A	Q	L	V	D	E
Template Known Secondary structure								S			T	T	T		T	T		S	S		S					S														G	G	G
Template Predicted Secondary structure
Template SS confidence
		1296	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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