Return to main results Retrieve Phyre Job Id

Job DescriptionP07026
Confidence74.31%DateThu Jan 5 11:00:07 GMT 2012
Rank306Aligned Residues43
% Identity19%Templated2dk5a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain RPO3F domain-like
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   179180.........190. ........200.........210.........220.
Predicted Secondary structure 


....






Query SS confidence 












. . . .





























Query Sequence  NFSKREKEILRWT. . . . AEGKTSAEIAMILSISENTVNFHQKNMQKK
Query Conservation   

 

 


 

....
 
 
  


  
 

  

  

  
  
Alig confidence 












....





























Template Conservation   
   
  

 

  

  


   
  

 
    
 



 

 
Template Sequence  GSDNQEKLVYQIIEDAGNKGIWSRDVRYKSNLPLTEINKILKNLESK
Template Known Secondary structure 
S
SS
TT
TT

T
Template Predicted Secondary structure 












Template SS confidence 














































   17..20.........30.........40.........50.........60...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions