 |
Job Description | P07026 | Confidence | 74.31% | Date | Thu Jan 5 11:00:07 GMT 2012 |
Rank | 306 | Aligned Residues | 43 |
% Identity | 19% | Template | d2dk5a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| RPO3F domain-like
|
Resolution | UNK |
|
  |   |
179 | 180 | . | . | . | . | . | . | . | . | . | 190 | . | |
|
|
|
. | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | F | S | K | R | E | K | E | I | L | R | W | T | . |
. |
. |
. |
A | E | G | K | T | S | A | E | I | A | M | I | L | S | I | S | E | N | T | V | N | F | H | Q | K | N | M | Q | K | K |
Query Conservation |   |
  |
|
|   |
|
|   |
|
|
|   |
|
| . | . | . | . |
|   |
|   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |
|   |
|
|
|
|   |
|
|   |
|
Template Sequence |   |
G | S | D | N | Q | E | K | L | V | Y | Q | I | I | E | D | A | G | N | K | G | I | W | S | R | D | V | R | Y | K | S | N | L | P | L | T | E | I | N | K | I | L | K | N | L | E | S | K |
Template Known Secondary structure |   |
| S |
| S | S |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|