Return to main results Retrieve Phyre Job Id

Job DescriptionP07026
Confidence99.73%DateThu Jan 5 11:00:07 GMT 2012
Rank11Aligned Residues65
% Identity28%Templated1l3la1
SCOP infoDNA/RNA-binding 3-helical bundle C-terminal effector domain of the bipartite response regulators GerE-like (LuxR/UhpA family of transcriptional regulators)
Resolution1.66

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   176...180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 





















Query SS confidence 
































































Query Sequence  PEMNFSKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI
Query Conservation      

 

 


 


 
 
  


  
 

  

  

  
  



  
 


  
   


Alig confidence 
































































Template Conservation 
   

 

  

  
  
 
   

  
 

  

      
  


  
  


  
   


Template Sequence  DAAWLDPKEATYLRWIAVGKTXEEIADVEGVKYNSVRVKLREAXKRFDVRSKAHLTALAIRRKLI
Template Known Secondary structure 





TTT

T

T
SSTT

Template Predicted Secondary structure 




















Template SS confidence 
































































   170.........180.........190.........200.........210.........220.........230....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions