Job Description P07026 Confidence 99.82% Date Thu Jan 5 11:00:07 GMT 2012 Rank 7 Aligned Residues 157 % Identity 20% Template c2uv0G_ PDB info PDB header:transcription Chain: G: PDB Molecule:transcriptional activator protein lasr; PDBTitle: structure of the p. aeruginosa lasr ligand-binding domain2 bound to its autoinducer Resolution 1.8 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	L	L	R	F	Q	R	M	E	T	A	E	E	V	Y	H	E	I	E	L	Q	A	Q	Q	L	E	Y	D	Y	Y	S	L	C	V	R	H	P	V	P	F	T	R	P	K	V	A	F	Y	T	N	Y	P	E	A	W	V	S	Y	Y	Q	A	K	N	F	L	A	I	D	P	V	L	N	P	E	N	F	S	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	F	L	E	L	E	R	S	S	G	K	L	E	W	S	A	I	L	Q	K	X	A	S	D	L	G	F	S	K	I	L	F	G	L	L	P	K	D	S	Q	D	Y	E	N	A	F	I	V	G	N	Y	P	A	A	W	R	E	H	Y	D	R	A	G	Y	A	R	V	D	P	T	V	S	H	C	T	Q	S	V	L
Template Known Secondary structure								T	T																			T											T	T				G	G	G	S						S											T	T	G	G	G	T											S	S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.			.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																.	.																																											.	.
Query SS confidence																.	.																																											.	.
Query Sequence		H	L	M	W	N	D	D	L	F	S	E	A	Q	P	.	.	L	W	E	A	A	R	A	H	G	L	R	R	G	V	T	Q	Y	L	M	L	P	N	R	A	L	G	F	L	S	F	S	R	C	S	A	R	E	I	P	I	L	S	.	.	D	E	L	Q	L	K	M	Q	L	L	V	R	E	S	L	M	A	L	M	R
Query Conservation																.	.																																											.	.
Alig confidence																.	.																																											.	.
Template Conservation
Template Sequence		P	I	F	W	E	P	S	I	Y	Q	T	R	K	Q	H	E	F	F	E	E	A	S	A	A	G	L	V	Y	G	L	T	X	P	L	H	G	A	R	G	E	L	G	A	L	S	L	S	V	E	A	E	N	R	A	E	A	N	R	F	X	E	S	V	L	P	T	L	W	X	L	K	D	Y	A	L	Q	S	G	A	G
Template Known Secondary structure							G	G	G			S													T	T		S										T	T	S												S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		168
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		165

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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