|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | |
|
50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  | . | . |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | D | T | L | I | S | N | N | A | L | W | S | K | M | L | V | E | E | D | P | G | F | F | E | K | L | A | Q | A | Q | K | P | R | F | L | W | I | G | C | S | D | S | R | V | P | A | . |
. |
E | R | L | T | G | L | E | P | G | E | L | F | V | H | R | N | V | A | N | L | V | I | H | T | D | L | N | C | L | S | V | V |
Query Conservation |   |
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |
|
|   |
|   |
|
|
|
|   |
| . | . |
|   |
|   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
|   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|   |
|   |
|
|
|
|   |
|   |   |
|   |
|   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|   |
|   |   |   | . | . | . |   |   |   |
|
|
Template Sequence |   |
I | K | D | I | L | R | E | N | Q | D | F | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
F | R | D | L | S | D | L | K | H | S | P | K | L | C | I | I | T | C | M | D | S | R | L | I | D | L | L | E | R | A | L | G | I | G | R | G | D | A | K | V | I | K | N | A | G | N | I | V | D | D | G | . |
. |
. |
V | I | R | S | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . | . | . | . | . | . |
|
| S | G | G | G | S | S | S | S |
|
|  |  |  |  |  |  |
|
| G | G | G | T | T |  |  |  |  |  |  | T |
|
| T | T | S |
|  |  |  |  |  | T | T |
|
|
|
|  |  | . | . | . |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  | . | . | . |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
|
. | . | . | . | 70 |
  |
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | Y | A | V | D | V | L | E | V | E | H | I | I | I | C | G | H | Y | G | C | G | G | V | Q | A | A | V | E | N | P | E | L | G | L | I | N | N | W | L | L | H | I | R | D | I | W | F | K | H | S | S | L | L | G | E | M | P | Q | E | R | R | L | D | T | L | C | E | L | N | V | M | E | Q | V | Y | N | L | G | H | S |
Query Conservation |   |
|
|
|
|   |   |
|   |
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |   |
|   |
|   |   |
|
|
|   |
|
|
|   |
|
|
|
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |
Template Sequence |   |
A | V | A | I | Y | A | L | G | D | N | E | I | I | I | V | G | H | T | D | C | G | M | A | R | L | D | . |
. |
. |
. |
. |
. |
. |
. |
E | D | L | I | V | S | R | M | R | E | L | G | V | E | E | E | V | I | E | N | F | S | I | D | V | L | N | P | V | G | D | E | E | E | N | V | I | E | G | V | K | R | L | K | S | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  | S | S |
|
| T | T | S |
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
  |   |
162 | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | M | Q | S | A | W | K | R | G | Q | K | V | T | I | H | G | W | A | Y | G | I | H | D | G | L | L | R | D | L | D | V | T | A |
Query Conservation |   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|
|
|   |
|
|   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   | . | . | . | . | . | . |   |   |
|   |
|   |
|   |   |
|
|
|   |
|
|   |
|   |   |
|   |   |
|   |
Template Sequence |   |
P | L | I | P | . |
. |
. |
. |
. |
. |
E | S | I | G | V | H | G | L | I | I | D | I | N | T | G | R | L | K | P | L | Y | L | D | E |
Template Known Secondary structure |   |
T | T | S |
| . | . | . | . | . | . | T | T | S |  |  |  |  |  |  |  |
| T | T | T |
|
|  |  |  |  |  |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
143 | . | . | . | |
|
|
|
|
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |