Job Description P61517 Confidence 24.55% Date Thu Jan 5 12:07:22 GMT 2012 Rank 29 Aligned Residues 43 % Identity 16% Template c3trkA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:nonstructural polyprotein; PDBTitle: structure of the chikungunya virus nsp2 protease Resolution 2.40 Å

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		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	S	T	I	M	Q	S	A	W	K	R	G	Q	K	V	T	I	H	G	W	A	Y	G	I	H	D	G	L	L	R	D	L	D	V	T	A	T	N	R	E	T	L	E	Q	R	Y	R	H	G	I	S	N	L	K	L	K	H	A	N
Query Conservation
Alig confidence																.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template Sequence		R	K	Y	P	F	T	K	G	K	W	N	I	N	K	.	.	.	.	.	.	.	Q	I	C	V	T	T	R	R	I	E	D	F	N	P	T	T	N	I	I	P	V	.	.	.	.	.	.	.	.	.	.	N	R	R	L	P	H	S	L
Template Known Secondary structure					G	G	G	T	T		T	T	S	S		.	.	.	.	.	.	.				T	T	T	T				S			T	T	S			S		S	.	.	.	.	.	.	.	.	.	.	S				S	S
Template Predicted Secondary structure																.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1105	.	.	.	.	1110	.	.	.	.	.	.	.	.								.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.											1140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions