Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8S1
Confidence92.40%DateThu Jan 5 11:08:37 GMT 2012
Rank166Aligned Residues45
% Identity7%Templated1z05a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain ROK associated domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.....
Predicted Secondary structure 









Query SS confidence 












































Query Sequence  MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENM
Query Conservation 
   

  
  
  
   

 
 

  
 






  
  

  
Alig confidence 












































Template Conservation 

  
   

  
      

 


   


  


  
  
   
Template Sequence  IKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDA
Template Known Secondary structure 
SB
T

T
Template Predicted Secondary structure 








Template SS confidence 












































   12.......20.........30.........40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions