Job Description P0A8S1 Confidence 96.54% Date Thu Jan 5 11:08:37 GMT 2012 Rank 49 Aligned Residues 78 % Identity 9% Template d1lnwa_ SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																		.	.																																	.	.	.	.														.
Query SS confidence																		.	.																																	.	.	.	.														.
Query Sequence		P	D	Y	R	T	L	Q	A	L	D	A	V	I	R	E	R	.	.	G	F	E	R	A	A	Q	K	L	C	I	T	Q	S	A	V	S	Q	R	I	K	Q	L	E	N	M	F	G	Q	P	L	L	.	.	.	.	V	R	T	V	P	P	R	P	T	E	Q	G	Q	.	K	L	L	A	L	L	R	Q	V	E	L	L
Query Conservation																		.	.																																	.	.	.	.														.
Alig confidence																		.	.																																	.	.	.	.														.
Template Conservation
Template Sequence		L	T	P	P	D	V	H	V	L	K	L	I	D	E	Q	R	G	L	N	L	Q	D	L	G	R	Q	X	C	R	D	K	A	L	I	T	R	K	I	R	E	L	E	G	R	N	L	V	R	R	E	R	N	P	S	D	Q	R	S	F	Q	L	F	L	T	D	E	G	L	A	I	H	Q	H	A	E	A	I	X	S	R
Template Known Secondary structure															S	S	T	T		B								T	T																T	T	S							S	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		77	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	E	W	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	D	E	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions