Job Description P0A8S1 Confidence 93.26% Date Thu Jan 5 11:08:37 GMT 2012 Rank 150 Aligned Residues 88 % Identity 13% Template c3r0aB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:putative transcriptional regulator; PDBTitle: possible transcriptional regulator from methanosarcina mazei go1 (gi2 21227196) Resolution 2.31 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																		.	.	.	.																																				.	.	.						.	.	.	.
Query SS confidence																		.	.	.	.																																				.	.	.						.	.	.	.
Query Sequence		P	D	Y	R	T	L	Q	A	L	D	A	V	I	R	E	R	.	.	.	.	G	F	E	R	A	A	Q	K	L	C	I	T	Q	S	A	V	S	Q	R	I	K	Q	L	E	N	M	F	G	Q	P	L	L	V	R	T	.	.	.	V	P	P	R	P	.	.	.	.	T	E	Q	G	Q	K	L	L	A	L	L	R	Q
Query Conservation																		.	.	.	.																																				.	.	.						.	.	.	.
Alig confidence																		.	.	.	.																									.											.	.	.						.	.	.	.
Template Conservation																																														.
Template Sequence		L	T	K	A	D	L	N	V	X	K	S	F	L	N	E	P	D	R	W	I	D	T	D	A	L	S	K	S	L	K	L	D	V	S	T	V	Q	R	S	V	K	K	L	H	.	E	K	E	I	L	Q	R	S	Q	Q	N	L	D	G	G	G	Y	V	Y	I	Y	K	I	Y	S	K	N	Q	I	R	N	I	I	Q	K
Template Known Secondary structure																S	T	T			B									T	T															.		T	T	S									T	T	S
Template Predicted Secondary structure																																														.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	L	L	E	E	E	W	L	G	D	E	Q	T	G	S	T	P	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	Q	S	W	A	D	R	L	G	Q	E	L	K	E	W	E	N	G	G
Template Known Secondary structure																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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