 |
Job Description | P0A8S1 | Confidence | 95.40% | Date | Thu Jan 5 11:08:37 GMT 2012 |
Rank | 95 | Aligned Residues | 76 |
% Identity | 20% | Template | c3hruA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:metalloregulator scar; |
PDBTitle: crystal structure of scar with bound zn2+
|
Resolution | 2.90 Å |
|
 |
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | |
|
|
|
. | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | L | D | A | V | I | R | E | R | G | . |
. |
. |
. |
F | E | R | A | A | Q | K | L | C | I | T | Q | S | A | V | S | Q | R | I | K | Q | L | E | N | M | F | G | Q | P | L | L | V | R | T | V | P | P | R | P | T | E | Q | G | Q | K | L | L | A | L | L | R | Q | V | E | L | L | E | E | E | W | L | G | D | E | Q |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |
|
| . | . | . | . |   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
|
|   |   |
|
|
|   |   |
|   |   |
|   |   | . |   |
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|
|
|   |
|   |
|
|   |   |   |
|
Template Sequence |   |
D | Y | L | K | C | L | Y | E | L | G | T | N | K | I | T | N | K | E | I | A | Q | L | M | Q | V | S | P | P | A | V | T | E | M | M | K | K | L | L | A | . |
E | E | L | L | I | K | D | K | K | A | G | Y | L | L | T | D | L | G | L | K | L | V | S | D | L | Y | R | K | H | R | L | I | E | V | F | L | V | H | H | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
|
|
|
|
|  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T | S |  |  |  |  | T | T | T |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
86 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
T |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
G |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
|
Template SS confidence |   |
|
  |   |
88 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|