Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8S1
Confidence100.00%DateThu Jan 5 11:08:37 GMT 2012
Rank7Aligned Residues277
% Identity17%Templatec3fzvC_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:probable transcriptional regulator; PDBTitle: crystal structure of pa01 protein, putative lysr family2 transcriptional regulator from pseudomonas aeruginosa
Resolution2.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  PDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLENMFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGD
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Template Sequence  YTLRQLKYFVTTVECGSVAEASRKLYIAQPSISTAVKGLEESFGVQLFSLTPAGARFYRKAQEL. . . . . . . . . LRXAHEF
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   4.....10.........20.........30.........40.........50.........60....... ..70....
 
   84.....90.........100.........110........ .120.........130.........140.........150.........160..
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Query Sequence  EQTGSTPLLLSLAVNADSLATWLLPALAPVLADSP. IRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLGAL
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Template Sequence  EQNDVIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLDSTIETEPLXPP
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  DYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPCHIVNSSEAFVQLARQGTTCCMIPH
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Template Sequence  QRPHALLPEGHRFAGQAQVSLRDLCLEPXILLDVQP. SRTYFVSLFEELGLTPNIAFSSPSIEXVRGXVGQGFGFSLLVT
Template Known Secondary structure  B

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   168.170.........180.........190.........200... ......210.........220.........230.........240......
 
   243......250....... ..260.........270.........280.........290
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Query Sequence  LQIEKELASGELIDL. . . . TPGLFQRRMLYWHRFAPESRMMRKVTDALLDYG
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Template Sequence  RPHSECTYDGKKVVXVDLAEPVSTSGLAAAWLKRAQLTKPARLFVDYCREQL
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   247..250.........260.........270.........280.........290........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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