Job Description P0A8S1 Confidence 99.87% Date Thu Jan 5 11:08:37 GMT 2012 Rank 9 Aligned Residues 205 % Identity 30% Template c3fd3A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:chromosome replication initiation inhibitor protein; PDBTitle: structure of the c-terminal domains of a lysr family protein from2 agrobacterium tumefaciens str. c58. Resolution 1.70 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	L	L	S	L	A	V	N	A	D	S	L	A	T	W	L	L	P	A	L	A	P	V	L	A	D	S	P	I	R	L	N	L	Q	V	E	D	E	T	R	T	Q	E	R	L	R	R	G	E	V	V	G	A	V	S	I	Q	H	Q	A	L	P	S	C	L	V	D	K	L	G	A	L	D	Y	L	F	V	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	T	L	N	I	A	T	N	A	D	S	L	G	T	W	F	L	D	A	V	S	K	F	T	G	G	S	D	Y	L	V	N	I	A	V	D	D	Q	D	H	T	V	E	W	L	R	G	G	R	V	L	A	A	V	T	A	H	D	K	P	V	Q	G	C	R	V	T	P	L	G	V	L	R	Y	H	A	T	A	S
Template Known Secondary structure															T	T	T											T	S	S										S	S								T	T	S		S					S			S			T	T
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	F	A	E	K	Y	F	P	N	G	V	T	R	S	A	L	L	K	A	P	V	V	A	F	D	H	L	D	D	M	H	Q	A	F	L	Q	Q	N	F	D	L	P	P	G	S	V	P	C	H	I	V	N	S	S	E	A	F	V	Q	L	A	R	Q	G	T	T	C	C	M	I	P	H	L	Q	I	E	K	E	L
Query Conservation
Alig confidence																																							.
Template Conservation																																							.
Template Sequence		P	D	F	X	A	R	H	F	A	D	G	V	T	P	A	A	L	A	R	A	P	G	L	T	F	N	Q	K	D	R	L	Q	A	S	W	I	R	.	T	A	L	G	E	D	V	S	Y	P	T	H	W	L	P	S	T	D	G	F	V	K	A	S	L	A	G	X	G	W	G	L	N	P	V	Q	L	V	A	E	H	L
Template Known Secondary structure										T	T		S						T	T	S					S	S	T	T										.				S	S																					T	T	S		B
Template Predicted Secondary structure																																							.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	G	E	L	I	D	L	T	P	G	L	F	Q	R	R	M	L	Y	W	H	R	F	A	P	E	S	R	M	M	R	K	V	T	D	A	L	L	D	Y	G	H	K	V	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	G	R	L	V	E	L	X	P	G	T	P	L	D	I	P	L	Y	W	Q	V	N	R	L	A	A	E	R	L	A	G	L	T	A	N	X	V	G	T	A	R	V	V	L	X
Template Known Secondary structure				T	S	S			S	S	T	T													T	T	T	T	T	T	T															S	B
Template Predicted Secondary structure
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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