Return to main results Retrieve Phyre Job Id

Job DescriptionP0A8S1
Confidence94.09%DateThu Jan 5 11:08:37 GMT 2012
Rank137Aligned Residues42
% Identity17%Templatec3deuB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:transcriptional regulator slya; PDBTitle: crystal structure of transcription regulatory protein slya2 from salmonella typhimurium in complex with salicylate3 ligands
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10......... 20.........30.........40.....
Predicted Secondary structure 


...



Query SS confidence 















. . .

























Query Sequence  PDYRTLQALDAVIRER. . . GFERAAQKLCITQSAVSQRIKQLENM
Query Conservation   

  
  
  
   
...
 
 

  
 






  
  

  
Alig confidence 















...

























Template Conservation 

  
  

  
       
  


    
    

  
  
   
Template Sequence  LTQTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDK
Template Known Secondary structure 

TS
SSB
TS
T
Template Predicted Secondary structure 











Template SS confidence 












































   30.........40.........50.........60.........70....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions