Job Description P0A8S1 Confidence 96.83% Date Thu Jan 5 11:08:37 GMT 2012 Rank 44 Aligned Residues 92 % Identity 10% Template c2nyxB_ PDB info PDB header:transcription Chain: B: PDB Molecule:probable transcriptional regulatory protein, rv1404; PDBTitle: crystal structure of rv1404 from mycobacterium tuberculosis Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.						.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.
Predicted Secondary structure																					.	.																																		.	.	.	.	.													.
Query SS confidence																					.	.																																		.	.	.	.	.													.
Query Sequence		M	K	R	P	D	Y	R	T	L	Q	A	L	D	A	V	I	R	E	R	.	.	G	F	E	R	A	A	Q	K	L	C	I	T	Q	S	A	V	S	Q	R	I	K	Q	L	E	N	M	F	G	Q	P	L	L	V	.	.	.	.	.	R	T	V	P	P	R	P	T	E	Q	G	Q	.	K	L	L	A	L	L	R	Q
Query Conservation																					.	.																																		.	.	.	.	.													.
Alig confidence																					.	.																											.							.	.	.	.	.													.
Template Conservation																																																	.
Template Sequence		D	E	N	I	T	I	P	Q	F	R	T	L	V	I	L	S	N	H	G	P	I	N	L	A	T	L	A	T	L	L	G	V	Q	P	S	A	T	G	R	X	V	D	R	L	V	G	A	.	E	L	I	D	R	L	P	H	P	T	S	R	R	E	L	L	A	A	L	T	K	R	G	R	D	V	V	R	Q	V	T	E
Template Known Secondary structure			T	T																	S											T	S															T	.	T	S							S	S	S		S
Template Predicted Secondary structure																																																	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	L	L	E	E	E	W	L	G	D	E	Q	T	G	S	T	P	L	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	R	R	T	E	I	A	R	I	V	E	Q	X	A	P	A	E	R	H	G	L
Template Known Secondary structure												T	T	S		G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions