Job Description P0A8S1 Confidence 99.71% Date Thu Jan 5 11:08:37 GMT 2012 Rank 16 Aligned Residues 198 % Identity 16% Template c2hxrA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type transcriptional regulator cynr; PDBTitle: structure of the ligand binding domain of e. coli cynr, a2 transcriptional regulator controlling cyanate metabolism Resolution 2.05 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		L	L	S	L	A	V	N	A	D	S	L	A	T	W	L	L	P	A	L	A	P	V	L	A	D	S	P	.	I	R	L	N	L	Q	V	E	D	E	T	R	T	Q	E	R	L	R	R	G	E	V	V	G	A	V	S	I	Q	H	Q	A	L	P	S	C	L	V	D	K	L	G	A	L	D	Y	L	F	V	S	S	K
Query Conservation																													.
Alig confidence																													.																																											.
Template Conservation																																																																								.
Template Sequence		S	L	R	I	A	V	T	P	T	F	T	S	Y	F	I	G	P	L	X	A	D	F	Y	A	R	Y	P	S	I	T	L	Q	L	Q	E	X	S	Q	E	K	I	E	D	X	L	C	R	D	E	L	D	V	G	I	A	F	A	P	V	H	S	P	E	L	E	A	I	P	L	L	.	T	E	S	L	A	L	V	V	A
Template Known Secondary structure													T	T	T													T	T	S																		T	T	S		S						S	S				T	T								.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	A	E	K	Y	F	P	N	G	V	T	R	S	A	L	L	K	A	P	V	V	A	F	D	H	L	D	D	M	H	Q	A	F	L	Q	Q	N	F	D	L	P	P	G	S	V	P	C	H	I	V	N	S	S	E	A	F	V	Q	L	A	R	Q	G	T	T	C	C	M	I	P	H	L	Q	I	E	K	E	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	H	H	P	L	A	V	H	E	Q	V	A	L	S	R	L	H	D	E	K	L	V	L	L	S	A	E	F	A	T	R	E	Q	I	D	H	Y	C	E	K	A	G	L	H	P	Q	V	V	I	E	A	N	S	I	S	A	V	L	E	L	I	R	R	T	S	L	S	T	L	L	P	A	A	I	A	T	Q	H	D	G
Template Known Secondary structure		T	T	S	G	G	G	G		S				G	G	G	G	G	G								T	T	S													T	T										S												S	S		B					T							T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	E	L	I	D	L	T	P	G	L	F	Q	R	R	M	L	Y	W	H	R	F	A	P	E	S	R	M	M	R	K	V	T	D	A	L	L	D	Y	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	A	I	S	L	A	P	P	L	L	E	R	T	A	V	L	L	R	R	K	N	S	W	Q	T	A	A	A	K	A	F	L	H	X	A	L	D	K	C
Template Known Secondary structure								S	S		S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions