 |
Job Description | P0A8S1 | Confidence | 96.55% | Date | Thu Jan 5 11:08:37 GMT 2012 |
Rank | 48 | Aligned Residues | 75 |
% Identity | 24% | Template | c2h09A_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcriptional regulator mntr; |
PDBTitle: crystal structure of diphtheria toxin repressor like protein2 from e. coli
|
Resolution | 2.10 Å |
|
 |
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | |
|
|
20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | T | L | Q | A | L | D | A | V | I | R | E | R | . |
. |
. |
G | F | E | R | A | A | Q | K | L | C | I | T | Q | S | A | V | S | Q | R | I | K | Q | L | E | N | M | F | G | Q | P | L | L | V | R | T | V | P | P | R | P | T | E | Q | G | Q | K | L | L | A | L | L | R | Q | V | E | L | L | E | E | E | W | L | G |
Query Conservation |   |
  |   |
|   |   |
|   |   |
|   |   |   |
| . | . | . |
|   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |
|   |   |
|   |   |   | . |
|
|
|   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |
|   |
Template Sequence |   |
D | Y | V | E | L | I | S | D | L | I | R | E | V | G | E | A | R | Q | V | D | M | A | A | R | L | G | V | S | Q | P | T | V | A | K | M | L | K | R | L | A | T | M | . |
G | L | I | E | M | I | P | W | R | G | V | F | L | T | A | E | G | E | K | L | A | Q | E | S | R | E | R | H | Q | I | V | E | N | F | L | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|  |  |  |  | T | T | T |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|