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Job Description | P0A8S1 | Confidence | 92.39% | Date | Thu Jan 5 11:08:37 GMT 2012 |
Rank | 167 | Aligned Residues | 43 |
% Identity | 12% | Template | c1h0mD_ |
PDB info |
PDB header:transcription/dna | Chain: D: PDB Molecule:transcriptional activator protein trar; |
PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna
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Resolution | 3.0 Å |
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7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
R | T | L | Q | A | L | D | A | V | I | R | E | R | G | F | E | R | A | A | Q | K | L | C | I | T | Q | S | A | V | S | Q | R | I | K | Q | L | E | N | M | F | G | Q | P |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | E | A | T | Y | L | R | W | I | A | V | G | K | T | X | E | E | I | A | D | V | E | G | V | K | Y | N | S | V | R | V | K | L | R | E | A | X | K | R | F | D | V | R |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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