Job Description P69853 Confidence 2.60% Date Thu Jan 5 12:12:13 GMT 2012 Rank 82 Aligned Residues 53 % Identity 19% Template c3iu5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:protein polybromo-1; PDBTitle: crystal structure of the first bromodomain of human poly-bromodomain2 containing protein 1 (pb1) Resolution 1.63 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	A	L	F	Y	Y	A	P	E	S	A	E	A	A	P	L	V	A	V	L	T	S	D	G	W	E	T	Q	W	P	L	P	E	A	S	L	A	P	L	V	T	A	F	Q	T	Q	C	E	E	T	H	A	Q	A	W	Q	R	L	F
Query Conservation
Alig confidence																							.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.
Template Sequence		L	C	E	L	F	I	R	A	P	K	R	R	N	Q	P	D	Y	Y	E	V	V	.	.	.	.	.	.	.	S	Q	P	I	D	L	M	K	I	Q	Q	K	L	K	M	E	E	Y	D	D	V	N	L	L	T	A	D	F	Q	L	L	F
Template Known Secondary structure		G	G	G	G	G	S	S				G	G	G									.	.	.	.	.	.	.	S	S													T	T				S
Template Predicted Secondary structure																							.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.								.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions