Job Description P0A959 Confidence 99.93% Date Thu Jan 5 11:09:27 GMT 2012 Rank 139 Aligned Residues 351 % Identity 14% Template d2gsaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		E	G	N	K	V	L	K	L	N	I	G	N	P	A	P	F	G	F	D	A	P	D	E	I	L	V	D	V	I	R	N	L	P	T	A	.	Q	G	Y	C	D	S	K	G	L	Y	S	A	R	K	A	I	M	Q	H	Y	Q	A	R	G	M	R	D	V	T	V	E	D	I	Y	I	G	N	G	V	S	E	L	I	V
Query Conservation																																					.
Alig confidence																																					.																				.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.
Template Sequence		D	G	N	R	Y	I	D	Y	V	G	T	W	G	P	A	I	C	G	H	A	H	P	E	V	I	E	A	L	K	V	A	M	E	K	G	T	S	F	G	A	P	C	A	L	E	N	V	L	A	E	M	V	N	D	A	.	.	.	.	.	.	.	V	P	S	I	E	M	V	R	F	V	N	S	G	T	E	A	C	M
Template Known Secondary structure		T	S						S	S	G	G	G	T	T	T	T	T		B	T													T	T		S			S	S																.	.	.	.	.	.	.	S	T	T		S						S	S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110								.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.														.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure									.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query SS confidence									.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Query Sequence		Q	A	M	Q	A	L	L	.	.	N	S	G	D	E	M	L	V	P	A	P	D	Y	P	L	W	T	A	A	V	S	L	S	S	G	K	A	V	H	Y	L	C	D	E	S	S	D	W	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	D	D	I	R	A	K	I	T	P	R	T	R	.	.	.	.
Query Conservation									.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Alig confidence									.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation
Template Sequence		A	V	L	R	L	M	R	A	Y	T	G	R	D	K	I	I	K	F	E	G	C	Y	H	G	H	A	D	M	F	L	V	K	A	G	S	G	V	A	T	L	G	L	P	S	S	P	G	V	P	K	K	T	T	A	N	T	L	T	T	P	Y	N	D	L	E	A	V	K	A	L	F	A	E	N	P	G	E	I	A	G
Template Known Secondary structure																				T	T					S		G	G	G		S	S								T	T			S		S	S	S						T	T						T	T										T	T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	I	I	N	P	N	N	P	T	G	A	V	Y	S	K	E	L	L	M	E	I	V	E	I	A	R	Q	H	N	L	I	I	F	A	D	E	I	Y	D	K	I	L	Y	D	D	A	E	H	H	S	I	A	P	L	A	P	D	L	L	T	I	T	F	N	G	L	S	K	T	Y	R	V	A	G	F	R	Q	G
Query Conservation
Alig confidence																																																		.	.	.	.	.																					.
Template Conservation																																																		.	.	.	.	.																					.
Template Sequence		V	I	L	E	P	I	V	G	N	S	G	F	I	V	P	D	A	G	F	L	E	G	L	R	E	I	T	L	E	H	D	A	L	L	V	F	D	E	V	M	T	G	F	R	I	A	Y	G	.	.	.	.	.	G	V	Q	E	K	F	G	V	T	P	D	L	T	T	L	G	K	I	I	G	.	G	G	L	P	V	G
Template Known Secondary structure						S	S	B		S	S	S		B				T	T												T	T								T	T	T	B	T	T	T	B	T	T	.	.	.	.	.						T	T				S						G	G	G	G	.	T	T	S
Template Predicted Secondary structure																																																		.	.	.	.	.																					.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure
Query SS confidence
Query Sequence		W	M	V	L	N	G	P	K	K	H	A	K	G	Y	I	E	G	L	E	M	L	A	S	M	R	L	C	A	N	V	P	A	Q	H	A	I	Q	T	A	L	G	G	Y	Q	S	I	S	E	F	I	T	P	G	G	R	L	Y	E	Q	R	N	R	A	W	E	L	I	N	D	I	P	G	V	S	C	V	K	P	R	G
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		A	Y	G	G	K	R	E	I	M	Q	L	V	.	.	A	P	A	G	P	M	Y	Q	A	G	T	L	S	G	N	P	L	A	M	T	A	G	I	K	T	L	E	L	L	R	Q	P	G	T	Y	E	Y	L	D	Q	I	T	K	R	L	S	D	G	L	L	A	I	A	Q	E	T	G	H	A	A	C	G	G	Q	V	S
Template Known Secondary structure											T	T	B	.	.	T	T	T	S	S	B					T	T	T	T																T	S	T	T																							T	T									T
Template Predicted Secondary structure														.	.
Template SS confidence
		283	.	.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		331	.	.	.	.	.	.	.	.	340								.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		A	L	Y	M	F	P	K	I	D	A	.	.	.	.	.	.	.	K	R	F	N	I	H	D	D	Q	K	M	V	L	D	F	L	L	Q	E	K	V	L	L	V	Q	G	T	A	F	N	W	P	W	P	D	H	F	R	I	V	T	L	P	R	V	D	D	I	E	L	S	L	S	K	F	A	R	F	L	S	G	Y
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																															.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		G	M	F	G	F	F	F	T	E	G	P	V	H	N	Y	E	D	A	K	K	S	D	L	Q	K	F	S	R	F	H	R	G	M	L	E	Q	G	I	Y	L	A	P	S	Q	F	E	A	.	.	.	.	.	.	G	F	T	S	L	A	H	T	E	E	D	I	D	A	T	L	A	A	A	R	T	V	M	S	A	L
Template Known Secondary structure		T						S	S	S					S					T	T	S															T	T					S	S	T	T	S		.	.	.	.	.	.					T	T																		T
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.							.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions